| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2278 |
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| Symbol | |
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| ID | 4172432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2771248 |
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| End bp | 2771673 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055287 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_661849 |
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| Protein GI | 109898594 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0502314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAGCC TGCTACTGCC GCAACGCCGA AAACAAAGTA TCAGTCTGAC TGCATTAATT
GATGTGGTAT TTATTCTTCT GATGTTCTTT ATGCTGACCT CGTCCTTCAC CAAGTTCAGT
ACTGTGGAAA TGCAATCGAG TTTGGCGGCC AGTGTGTTGT CTGACAGCAA ACCACAACTC
TTACGTTTAA GCCCGGACGG GCAGTTATCC GATGCACAAC TGTCGGTTGG GAACAGCGCA
ACGCTGACAG ATTCAGCCCT GTCAAATGTG TTTGAAACGC ATTTGCCAAC GGTGTTACAG
CCAGCAGCTG ATACGCAAGT ACAAGTCATT GTTGATGCGC TTTCACGCAT GAAGGTATTG
GGTTTTACGC AAGTTACTTT GGGTAAGTCT CGTCCTCAGG CTAACGCGAT AGCGGGGCAA
CAATGA
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| Protein sequence | MSSLLLPQRR KQSISLTALI DVVFILLMFF MLTSSFTKFS TVEMQSSLAA SVLSDSKPQL
LRLSPDGQLS DAQLSVGNSA TLTDSALSNV FETHLPTVLQ PAADTQVQVI VDALSRMKVL
GFTQVTLGKS RPQANAIAGQ Q
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