Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2019 |
Symbol | |
ID | 4173893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2458967 |
End bp | 2459800 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638055027 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_661591 |
Protein GI | 109898336 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.757502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGTACG ATACAAGTCT TAAGGTAGCG TTAAAAAATA TCAGCAACTG GATAGCAACT AAATCTCTTT ATTACAGTCC AGAGCGCAAG AAATATTTAT ACGGATTCTA TGCTGGCCTA GGGAATTTTG ACGTATATGA GTTACCAGAC GAATATCAAT GCTTAATTTC AAATAGCAAT CTTAAAGGTA GTGAGCTACA TGCTGTTGTT TTATCGACAC TCCCTATTGA GCATACAACT ACAGATGAGA TGAAAGCCTA TGAGACTTCA ATTCGCTGTG TATTCAGCGC TAAATTATAC GGATATAAGC ACTCCTGGTC TCTACAATCT GCGATTAAAT TTGCCTCACT ACATCATGCG AACCAAAAAC GTAAGAGTAC CGGCGAGCCA TATGTAAACC ACTTGATTGA AGTGGTGCAA CTCATCCAGC GTTATGAATC AAGTAGCGAT GAAAATACTA TGATAGCCGC AGCTTTGCAT GACATTTTAG AAGACACTGA GGTTACTAGT ATTGGTCTAA AATACCTATT TGGGAGCGAA GTTTCAAAAA TAGTACAAGA GCTGACGTGC AACTCAGCGA ACAATTCTGA TAATAAAAAA ATAGCGTTAT TAAATCAGAT TGCCATAGGG AGTAAAGCAG CGCAATCAAT CAAATTAGCT GACGTAATAT CTAACGTATC TTCTATCCCT AGCCAGTGGT CGCTTGAACG GAAGTTAGCT TATATAGACT GGTGTAAAAA AGTAGCAAAG GTATGCTCAT CTTCATCTAA ACGACTATAT GATCAATTTA ATTTAAAAGT ACAATTAGTA GAAACTGCGG TAAACGACGA ATAA
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Protein sequence | MGYDTSLKVA LKNISNWIAT KSLYYSPERK KYLYGFYAGL GNFDVYELPD EYQCLISNSN LKGSELHAVV LSTLPIEHTT TDEMKAYETS IRCVFSAKLY GYKHSWSLQS AIKFASLHHA NQKRKSTGEP YVNHLIEVVQ LIQRYESSSD ENTMIAAALH DILEDTEVTS IGLKYLFGSE VSKIVQELTC NSANNSDNKK IALLNQIAIG SKAAQSIKLA DVISNVSSIP SQWSLERKLA YIDWCKKVAK VCSSSSKRLY DQFNLKVQLV ETAVNDE
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