| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1365 |
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| Symbol | |
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| ID | 4171862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1640599 |
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| End bp | 1643475 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054378 |
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| Product | peptidase M16-like |
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| Protein accession | YP_660945 |
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| Protein GI | 109897690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGT TTCTCGTGGT AAAAAAAATC GTTATATTAT CGACATTTGC TGGCATTTTA
TCCGCATGTC AACCTACCAA CTCTGTGACA CAACCTACGA CTACAAATTT ACCCACTGGG
GTAACCTTAG TCGCTGAGCA GGGTGCAAGT GACGACCAAG TCAGGATCCC TTATAAAAAG
TATCGTCTTG CCAATGGATT AACCCTAGTC TTACACGAAG ACCATTCCGA TCCTCTTGTA
CATGTTGATG TGACCTACCA CGTGGGCTCA GCTCGAGAAG AAGTGGGTAA GTCAGGCTTT
GCTCATTTTT TTGAACACAT GATGTTCCAA GGCTCGAAAA ACGTTGCAGA TGACGAACAT
ATAAAAATAG TGACTGAGGC TGGTGGTAAT ATGAATGGCA CCACCAATTC TGACCGCACT
AACTATTATG AAACGGTTCC GGCTAATCAA CTTGAAAAAA TGATGTGGCT TGAAGCCGAT
CGCATGGGTT TCTTGCTCGG CTCAGTGACT CAAGAAAAGT TTGAGATACA GCGCGAAACG
GTCAAAAACG AGCGTGGTCA GAGTTACGAC AACCAGCCTT ATGGCCTGCG TAGTGAGCGT
AATTCTGAAG CCTTGTATCC GGCAGGGCAC CCTTATTCGT GGTCAACCAT TGGATATATT
GAGGATTTGA ATCGCGTTAA CGTAGATGAC CTAAAAGCGT TCTTCAAACG CTGGTATGGC
CCTAATAATG CGGTGTTGAC TATTGGCGGT GACATCGAGC CAGAGCAAGT GCTTGGATGG
GCAAACAAAT ACTTCGGTTC TATTCCTGCT GGCCCAAGTG TGAAAAACGC TGAGAAAGAA
CTTGTCACCC TAGATGAAGC GCGCTTTGTT ACTTTAGAAG ATGAAATACA CTTGCCCTTA
TTGCAGGTGA CGTTTCCTAC TGTTTATGTG CGCCATGAAG ACGAGGCGCC GCTTGATGTG
TTATCCAATA TTCTAGGGGC GGGTAAAACG TCATTGTTTT ATAAGAATCT GGTCAAAGAT
GGCTACGCAG TCCAAGCAAT GGTTTCTCAC CCCTGCCGAG AGCTGGCCTG TGAATTTCAA
TTGATAGCAC TTGCTAACCC GCAAAATAGC ACCAACTTGT CTGAGCTTTA TGCACGTTTC
GAGCAAACGT TGGCTGAGTT TGAAGAGCGC GGTGTGAGCG AAGACGACTT AAACCGCACT
AAAGTGGGTA TTGAATCTTC AACGATCTTC GGTTTGCAAA GTGTGTCCGG TAAGGTATCA
ACGCTCGCCT CAAATCAAAC CTTTGACGGT GAGCCTGACA TGGTGCAGTA CGATTTGGAC
CGCTACAATG CTGTCACAGC ACAAGACGTG ATGCGTGTTT ACCAGCGTTA CATAAAAGAT
AAACCGAGTG TGGTGTTAAG TATCGTGCCT AATGGCCAAG TGGATTTAGC TGCCAAGCCG
GCTAATTTCA CGGTCCCTAA GCGTCAACTA GATAATATCA AAACAGTGCA AGCGCACATC
GAACAAGCCA CGATTGTTGA TACCTTCGAT CGCAGTGTTC AGCCCCCAGC GGGGCCTTCA
CCTGTGGTGA GCGTGCCTGA TTTTGACGAG CAGCGTTTTG AGAACGGGTT AACCCTTGTC
AGCTTAACAA CGGATGAAAC GCCCACGGTG TCGATTAGCT TCAACATGGA AGGCGGGCCT
TTACTTGACC CTATCGACAA GGCTGGTTTA GCGTCTTTTA CTGCGCAAAT GATGAATGAA
ACGACCAAAG GCTTCACCAA TGAAGAAATG GCCAATCAAT TAGCGTTATT AGGTAGCAGC
ATTCGTTTCG ATGCAAATGG CCGCTTTACC ACGGTGCGTA TTAATAGTTT GTCACGTAAC
TTAGATGCAA CCTTGGCGTT ATTTAAAAAG AAGATGTTCA GCCCCGCGTT TTTACAAAGT
GATTTCCAGC GATTAAAACA ACGTTCTGCT CAGTCACTTC AACAGCAAGT TAAAAACCCG
TCTGTTTTGG CAAGTCGAGC GGTCAGCGAG TTACTGTTTG GCAAGGATAA CCGTGTCAGC
CTGCCAGATT CTGGCACCCT GAACACGATT CAAAATATTT CACTAGATGA TGTGAAAGCT
TACTATCAGC AATATTATTC ACCTTCGAAA GCAAACGTAG TCGTAGTGGG AGACGTAAAT
ACGCAATCTT TGCAGACATC TTTAGACTTT TTAACAAATT GGCCAGCAAA GCCTTATCAG
ATTAAGGATT ATGCTGAATT TCCTAAGATG GGTAAGCCGG TTATTTATCT GGTGGATAAA
CCAGGGGCAA AGCAATCGGT TGTATCTATC TTTAAACCTT ACTTGCCATA CGATGCCACA
GGCGAGCAAT TTAGAAGTAA GCTGATGAAT TTCGCTCTTG GTGGCGTATT CAGTAGTCGT
ATCAACCTGA ATTTGCGCGA AGATAAAGGC TATACCTATG GCGCTTCAAC CAATTTTATT
GGTGGCAAAA CGCTAGGTTG GTTTAACGCT AGCGCTGACC TCAAGCAAGA CAACACCGTT
GATGGTATTC GTGAAATGCT CAGTGAAATA ACTGAGTATC ATGAGAAAGG GATGACGCAA
ACTGAGTTAG AGCTGATGCG CAATGCCTTT ACCCAAGGAG ATGCATTAGA ATATGAGACA
CCGTCCAGCA AAGCGGGATT CCTGCGTCAC CTGCTGACCT ACGGCTTGGA CAAATCGTAC
CGCGGGACGC AAAACAAGAT TATTCATAAT ATTGGTAAAG ATGAACTGAA TGCACTTGCT
GCAAAGGTGC TTGATCCCAA CTCAATGCAA GTTGTAGTCG TTGGAGATGC AAGTGTCATC
CGCGCTCAGT TGGCAACGCT TGGAAGGGAA GTGGTTGACC TGACCGTTGA ATATTAA
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| Protein sequence | MGKFLVVKKI VILSTFAGIL SACQPTNSVT QPTTTNLPTG VTLVAEQGAS DDQVRIPYKK
YRLANGLTLV LHEDHSDPLV HVDVTYHVGS AREEVGKSGF AHFFEHMMFQ GSKNVADDEH
IKIVTEAGGN MNGTTNSDRT NYYETVPANQ LEKMMWLEAD RMGFLLGSVT QEKFEIQRET
VKNERGQSYD NQPYGLRSER NSEALYPAGH PYSWSTIGYI EDLNRVNVDD LKAFFKRWYG
PNNAVLTIGG DIEPEQVLGW ANKYFGSIPA GPSVKNAEKE LVTLDEARFV TLEDEIHLPL
LQVTFPTVYV RHEDEAPLDV LSNILGAGKT SLFYKNLVKD GYAVQAMVSH PCRELACEFQ
LIALANPQNS TNLSELYARF EQTLAEFEER GVSEDDLNRT KVGIESSTIF GLQSVSGKVS
TLASNQTFDG EPDMVQYDLD RYNAVTAQDV MRVYQRYIKD KPSVVLSIVP NGQVDLAAKP
ANFTVPKRQL DNIKTVQAHI EQATIVDTFD RSVQPPAGPS PVVSVPDFDE QRFENGLTLV
SLTTDETPTV SISFNMEGGP LLDPIDKAGL ASFTAQMMNE TTKGFTNEEM ANQLALLGSS
IRFDANGRFT TVRINSLSRN LDATLALFKK KMFSPAFLQS DFQRLKQRSA QSLQQQVKNP
SVLASRAVSE LLFGKDNRVS LPDSGTLNTI QNISLDDVKA YYQQYYSPSK ANVVVVGDVN
TQSLQTSLDF LTNWPAKPYQ IKDYAEFPKM GKPVIYLVDK PGAKQSVVSI FKPYLPYDAT
GEQFRSKLMN FALGGVFSSR INLNLREDKG YTYGASTNFI GGKTLGWFNA SADLKQDNTV
DGIREMLSEI TEYHEKGMTQ TELELMRNAF TQGDALEYET PSSKAGFLRH LLTYGLDKSY
RGTQNKIIHN IGKDELNALA AKVLDPNSMQ VVVVGDASVI RAQLATLGRE VVDLTVEY
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