| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0871 |
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| Symbol | |
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| ID | 4172000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1028189 |
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| End bp | 1028932 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053874 |
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| Product | siderophore-interacting protein |
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| Protein accession | YP_660453 |
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| Protein GI | 109897198 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2375] Siderophore-interacting protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.314795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACTA GGCCCGAACC AAGAAATTTA GTTGTGATCA ACAGCCGTTA TATCACACCT
AATATGTTAC GTATTACCTT AGGCGGCGAG GAGATGAGTG ACTTTCCCGC AGATCAAGAC
AGCGCTTACG TGAAGTTAAT TTTTCCAAGG GCCGATGGCG GTCGTCCTAT GATGAGAACC
TACACCGTTC GTAGCCAAAC AGAGAATTCG ATTGATGTTG ATTTTGCTTT GCATGAAGCG
AAAGGCCCAG CCTCTTCATG GGCAGTCAGT GCTAAAGTCG GCGATAAGAT TATTGTTGGC
GGGCCTGGTC CTAAAAAACT GCTTAACCAA GATGCAGATT GGGTAATTAT CTGTGGTGAT
ATGACAGCCT TACCGGCTAT TAGTGTCAAT CTTGCAATAT TACCAAAAGA CACAAAAGGT
TATGCGGTGC TAGAAGTAGT AGATGAAGCA GATATCCAAG AATTGGCGCA TCCTGACAAT
GTGCAATTAA TATGGGTTGT CAGCAAACCC AGTACCGATA CAGAAGTCCT GCCTTTACTG
GATCGCATCA AATCACTACC TGAACTTGAA GGTAATTTAT CAGTATGGGT TGCCTGTGAA
TTCAGCACAA TGAAAGCTAT TCGTAAGTAT TTGAGAACCA CTTTTGACCT ACCTAAAAGT
CATTTCTATA CCTCCAGTTA CTGGAAACTC GGGGTCAGTG AAGATGAGCA TAAAATTGCT
AAAAAAGAAG ATGCAGAATC CTAA
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| Protein sequence | MATRPEPRNL VVINSRYITP NMLRITLGGE EMSDFPADQD SAYVKLIFPR ADGGRPMMRT
YTVRSQTENS IDVDFALHEA KGPASSWAVS AKVGDKIIVG GPGPKKLLNQ DADWVIICGD
MTALPAISVN LAILPKDTKG YAVLEVVDEA DIQELAHPDN VQLIWVVSKP STDTEVLPLL
DRIKSLPELE GNLSVWVACE FSTMKAIRKY LRTTFDLPKS HFYTSSYWKL GVSEDEHKIA
KKEDAES
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