| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0567 |
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| Symbol | |
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| ID | 4174014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 654930 |
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| End bp | 655655 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053569 |
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| Product | ABC transporter related |
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| Protein accession | YP_660150 |
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| Protein GI | 109896895 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.714932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGACGT TAAAAGCCTC GCATTTGGCT AAATCCTATA AATCGCGTCA AGTTGTGCGT
GATGTCAGTC TAGAAGTGTC CACTGGCCAG ATTGTCGGTT TACTTGGTCC AAACGGTGCA
GGTAAAACAA CCACGTTTTA TATGATTGTC GGTTTGGTTC CCTTAGATAA GGGAGAAATC
AGTATTGATC AGCAAGATCT TACCCTACAG CCCATGCATA TGCGCGCTCG TTTAGGGATT
GGTTACTTAC CCCAAGAAGC CTCTATTTTT CGAAAACTGA CAGTCTATCA AAACTTGATG
GCTATCTTGC AGACACGCAA AGAGCTCAGT GCAGAACAAA GAGAACAGCA AGCGGATTCA
TTACTCGATG AGTTCAATAT AAATCATATT CGTAACAGTG CTGGTATGAG TTTGTCTGGA
GGTGAACGCC GCCGGGTAGA AATAGCGCGG GCACTGGCAG CCGATCCAGA ATTTATTCTG
CTCGATGAGC CGTTTGCCGG TGTTGATCCT ATTTCAGTTA ATGATATTAA AAAAATTATT
CAACATTTAC GTGACCGTGG TATTGGTGTT TTGATAACCG ACCACAATGT AAGAGAGACA
CTCGATGTGT GTGAGAAAGC TTACATTGTT AGTCATGGTG AACTCATCGC TTCTGGCACG
GCAGAAGAAG TATTAAGTGA TCAACGTGTA AGAGATGTAT ACCTAGGCGA ACAATTCAGG
CTATAG
|
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| Protein sequence | MATLKASHLA KSYKSRQVVR DVSLEVSTGQ IVGLLGPNGA GKTTTFYMIV GLVPLDKGEI
SIDQQDLTLQ PMHMRARLGI GYLPQEASIF RKLTVYQNLM AILQTRKELS AEQREQQADS
LLDEFNINHI RNSAGMSLSG GERRRVEIAR ALAADPEFIL LDEPFAGVDP ISVNDIKKII
QHLRDRGIGV LITDHNVRET LDVCEKAYIV SHGELIASGT AEEVLSDQRV RDVYLGEQFR
L
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