| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0985 |
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| Symbol | |
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| ID | 5055466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 876962 |
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| End bp | 879070 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640468541 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001153217 |
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| Protein GI | 145591215 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000497741 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAGGC GGGTGGAGCT CATTAATTTT AAGGCGCATG CCAAGGCGGC TTTTAGATTT
GGCGAGGGGG TCAACTTCAT CTATGGGCCA AACGGCTCAG GCAAGACGTC GCTGATGGAG
GCCATATCAG TTGCTCTCTT CGGCTCTACT TGGGTAAGGA AGGTGGGCTC GAAGTGGTCG
GACTACCTGC GCCGGGGATC CACGGCGGGC GAGGTTAGGC TATATCTCAG CTACCAGGGA
GGCGAGGTGG TGATTGCCAG ACGTTTTGGG GAAAGCGGCA CCTCTCCTTC AGGCACCTAC
ATGGCCGTAA ACGGCTCTAT TATCGCTAGG GGCGATGCGG ACGTCACAGC CGCCGTGGCG
ACGAAGTTGG GGATAGGCGT GGAGGAGTTT CGACATCTTC TTTACATACG CCAGGGCGAG
TTGAGGAGAA TACTACAGGA GGCTGAGTAT CTAGACAGGA TTTTGAGACT CGACGAGTTT
GACAAGGTAG ACGAGCTGTA CAGAGACGTC TACAACGAGC TTAGGGCCAG GAGGGAGAGG
ATTGGGGGGA GAGCCGAGGA GCTTGAAAAA CGAATCCAAC CTCTCCGATC AAGGCTGGAA
GACCTCCGCA GAAGGCTGGG GGAGGTGGAG GCTAAGCTAA GGGAACTTGA GCCCTATCAA
AACCGGCTAC CCGAGGCGGA GAGAAGGTAC CTGGAGCTGA GGGATAGGCA CAACGTCTTG
TTGGCAGAAA GAGAGCAACT GGAGAGGAGA CTCGAGGAGC TGGCCCACGC CGCCCTAGAG
GCTGAGAAAG ATGTGGAACA GCTAGAAGAG GAGCTGGAGA AGATCCGCAA GGCTGCTCAA
GAGCTCAAAA CTCTCCCCAC ATTCGGCGAC GTCGAGAAGG AGTATTTTGA ACTACGACAA
GTAGTGTCCG TAGTTGAGAA GATACCGCTG GAGGTAAAGA GCTACGATCC CTCTAGGCTT
GAGGAGGCGA GGCAGAGACT TGAAGACTCC TCGAGGAGGC TTGCCCAGGT TAAGTCGCGG
CTTGAGCTGT TGAGGGACGT GGTGAGGCTC GCCAGCAGAG CCGAAGGCGG CGTATGTCCA
GTCTGCGGCT CACCCCTCCG CCCCGAGGCG GTGAGAAGAC ATGAACTAGA GATTATCGGC
CTAGAAAAGG AGGAAAAAAG ACTAGTCTCA TTAATCGAGG AGCTAAGAGA CGAGATTAAG
AGACTTGAAT CTCTAGACCG CGCCTATCAG ACCTACAGAG AATACCTCAA CGTGGACCTT
CTCTCTGCCA AGAAGAGACT TACTGAGCTG GAAAAGATGT ACAAGGCCAA AGTGGAGACA
GAGCGGCGCC GCGCCTATCT GGCCGCCCTA GTAGAAAGAG AGGCCGAAGT GCTGGGCAAG
TTAGAAAAAG CAAAGCGGAG GCTGGCAGAG GCTGAGGTAG CCATAGGCGA GGTGGGCGAG
CGGCTCAAGA AGGTAGAAGA GGAGCTAGAA AAAACCCAGG CCCTACTTAA AGAAGCCGAG
GCTGAGTACC TACTCATTAG AGATAGGCAC AGGGAGTACA CGGCGTTGCA GACCTTGGCA
AAGGAACTAA GAGAGCAACT ACAATCAACC GAGCTCGAGC TACAAGAGGC CGTAGCTGAG
CTGGAAAAAG CTAGGGAAGA CCTCTCTAAG CTTGACAAGG CCCTTGCCGT AGCTAAGAAC
GTGCGGGGGA CCTTAGCCGA GTTAAAGCCC GCGGCCCGGC AGATATTCCT ACGGGCAATA
AACGAGGAGC TCAACCACGT CTTCCTGAAA CTAAGACACA AGGACGCCTT TAAGTCTGCG
CAACTAGTTG AAGCTAACGG AAGATACGTG GCCAGGATAT CCACCCCAAA CGGCTACATT
GACCACGGCC TACTCTCCCT TGGCGAGCAG AACCTCCTAG CTCTCTCCCT CCGCGTCGCC
CTCGCAAGAG CTCTCCTCGG AGGAGCCCCA TTCATGATGC TAGACGAGCC AACAGAACAC
CTAGACGAAG AACACAGAAA AAGGATAGTA GAACTAGTAA GAGACCTAAC CTCTGTGGTG
CCCACAGTAG TCGTCACCTC CCACCTAGGC GAATTCGAAG AAGTCGCCGA CAACATTATC
CATCTATAA
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| Protein sequence | MIRRVELINF KAHAKAAFRF GEGVNFIYGP NGSGKTSLME AISVALFGST WVRKVGSKWS
DYLRRGSTAG EVRLYLSYQG GEVVIARRFG ESGTSPSGTY MAVNGSIIAR GDADVTAAVA
TKLGIGVEEF RHLLYIRQGE LRRILQEAEY LDRILRLDEF DKVDELYRDV YNELRARRER
IGGRAEELEK RIQPLRSRLE DLRRRLGEVE AKLRELEPYQ NRLPEAERRY LELRDRHNVL
LAEREQLERR LEELAHAALE AEKDVEQLEE ELEKIRKAAQ ELKTLPTFGD VEKEYFELRQ
VVSVVEKIPL EVKSYDPSRL EEARQRLEDS SRRLAQVKSR LELLRDVVRL ASRAEGGVCP
VCGSPLRPEA VRRHELEIIG LEKEEKRLVS LIEELRDEIK RLESLDRAYQ TYREYLNVDL
LSAKKRLTEL EKMYKAKVET ERRRAYLAAL VEREAEVLGK LEKAKRRLAE AEVAIGEVGE
RLKKVEEELE KTQALLKEAE AEYLLIRDRH REYTALQTLA KELREQLQST ELELQEAVAE
LEKAREDLSK LDKALAVAKN VRGTLAELKP AARQIFLRAI NEELNHVFLK LRHKDAFKSA
QLVEANGRYV ARISTPNGYI DHGLLSLGEQ NLLALSLRVA LARALLGGAP FMMLDEPTEH
LDEEHRKRIV ELVRDLTSVV PTVVVTSHLG EFEEVADNII HL
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