Gene Pars_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0922 
Symbol 
ID5056341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp814725 
End bp815945 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content52% 
IMG OID640468478 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001153154 
Protein GI145591152 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTAT TCTTTAGAAA TTTTCTCAAA AAATTTAAAT ATAGGGTATA TTTTTTGCAC 
TATGGTAAAA AATTATTAAT ACTCGGAGGC GGCACCGGAG GCTTGATAAT ATCTAGGGAA
GTTAGGGAAC TTTTAGGCCC TGGCGAGGTG GAGATTACCG TCGTTGACAT GAAGGATAGG
ACGGAGTTTA GGCCTTCTTA CCTATATGTG GCTTTTGGCT ACAGGCGGCC TGAGCAGATA
AGCGCTCCTC TTGATCTTTT AAAAAGACAC AACGTAAATT TCGTAAAGGC TAAGGTCACA
AAAATCGACC CGGCCAATCG CAAGGTGTCG ACCACGGCTG GCGATTTCAC TTACGACAAT
TTGGTGGTCG CCCTTGGGGC CGAGACTGTG GACACGGGCT TCCCGCATAC GTGGGAGCTT
GAGCCCTCGC TCAAGGTGAC TGACGCCCTG GTGCAGGTCA AGAGCGGCCA CGTGGTGATT
GGGGTGTACT CGCTACCTTA TAGATGCCCG CCTGCGCCGA TTGAGCTGGC CATGCTGACC
CACTTCTACT ACCTAACAAG GGGGCTTAGA GACAAGGTGA AGATTACTGT TGTACACCCA
ATGAAGAGGC CTTTTGAGAA CTTTGGCCCA ATGGCGGCGA AGTGGATGTC CGGCTTCCTT
CAGCAACTAG GCATCGACTA CATTGGCGTC GGCCAGAGCG TGGCCATTAA AAACCTAGGC
AAAAACGAGA TAGAGACCAC TACAGGGGAG AAGATAAAGT TCGACGCGGC GTTTATTGTA
CCGCCTCACA AGGCGCCAGA TCCTGTGCTT AACAGCGACT TGGCCAAGAA CGGCTGGGCC
GCGCCCCGGA ATCCGGCAAA CGGCGATTTC AGAAGCGAAA AGTACGACGA CGTCTATGTA
ATAGGCGACG TGGCGGCGCC CAACGTCCCC GTGGGGATGG CCGGCACGAT ACTGCACAGC
TACGCCCCGT GGGTGGTGAG CAATATTGTG GCCGATTTGG CTGGCGTTTC GCTTGGCAAG
CCGCCATTTA GGATCGTGGG CACCTGCGCG CTGGATGTCG GCGCATATGG CATGGCTGCT
GCCTGCGACT TCACGCCATT TGTAAAGAAG CAGAAGCCTT ATCCAGATTG CATGTTCCTG
CCGCCTTCGC CAGTGACGAG GATGTTTAAG GAGATGTTTG AGAAGATATA CTTTAATTGG
TTGCTGGGGG TGGTGCCATG A
 
Protein sequence
MELFFRNFLK KFKYRVYFLH YGKKLLILGG GTGGLIISRE VRELLGPGEV EITVVDMKDR 
TEFRPSYLYV AFGYRRPEQI SAPLDLLKRH NVNFVKAKVT KIDPANRKVS TTAGDFTYDN
LVVALGAETV DTGFPHTWEL EPSLKVTDAL VQVKSGHVVI GVYSLPYRCP PAPIELAMLT
HFYYLTRGLR DKVKITVVHP MKRPFENFGP MAAKWMSGFL QQLGIDYIGV GQSVAIKNLG
KNEIETTTGE KIKFDAAFIV PPHKAPDPVL NSDLAKNGWA APRNPANGDF RSEKYDDVYV
IGDVAAPNVP VGMAGTILHS YAPWVVSNIV ADLAGVSLGK PPFRIVGTCA LDVGAYGMAA
ACDFTPFVKK QKPYPDCMFL PPSPVTRMFK EMFEKIYFNW LLGVVP