Gene Paes_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1340 
Symbol 
ID6460538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1462232 
End bp1462651 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content49% 
IMG OID642725324 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_002016009 
Protein GI194334149 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00268511 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000109238 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACTCTT ACAAAATGGT GCTTTCAAGC AGTATCGAGG AGTGTCGGAA ACTGCATGAT 
TTCCTTTCGG TCATGGCTGA GATTGAAGGG TTCAGTGAGC CATTTGCATT GGAACTCGAA
CTGGTAATCA AAGAGGCGTT TGTCAATGCT GTACAGCATG GCAATGCGCA TGTGCAGGGT
GCGGTCGTGC GTTTGCATTT CAAGCTCGTC ATTGAAGATG GCGTTCGTAC CCTTTTTGTG
GAGATCTGCG ATTCCGGCCC CGGCTTTTCT GTCTATGAAA TTGCTGATCC TACAGTGCCG
GAAATGCTGA TGCAGCCGTC CGGCAGGGGT GTGTTTTTTA TCCGTTCCTA TGCTGATATT
GTCCGTCAGG AGTGTGATGA TGAAGGCTGT CGCCTCCTTC TGCGGATGAT GCCTTATTAA
 
Protein sequence
MNSYKMVLSS SIEECRKLHD FLSVMAEIEG FSEPFALELE LVIKEAFVNA VQHGNAHVQG 
AVVRLHFKLV IEDGVRTLFV EICDSGPGFS VYEIADPTVP EMLMQPSGRG VFFIRSYADI
VRQECDDEGC RLLLRMMPY