| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1318 |
|---|
| Symbol | |
|---|
| ID | 6460828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1436663 |
|---|
| End bp | 1437946 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642725305 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_002015990 |
|---|
| Protein GI | 194334130 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.141611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0459431 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGG AAACTGAGAG ATTGGCTGCG TACCGGCAAC TGCGGACTGG AATCCGAGGT
TCAGAAAAGC ATCTGATTGC AGGTATCGAT ATTGCTAAGG ACAAGCATTA TGCATTCTTC
GGCACCGCCA CAGGAAAGAC ATTATGCAAA CAATTCACGT TTCCGAACAG CAACGAGGGG
TTTGAACTGT TGTGTTCAAA AGCAGAAACC CTCCGCTTGC AGCATCAGCT GCAACAGGTG
GTTATCGGTG TAGAACCGAC AGCAAATTAT CACAAACCGC TGGCCGATCA TCTTGTTCGA
CACGGATTGC TGGTTGTACA GGTCTCCGGG GTTGCGGTCA AAAAGAATCG AGAACTGCTC
GATGGGCGTT GGGATAAGCA TGACCGCAAA GATGCGGCCA ATATTGCCGA TCTTATCGCT
CAAGGCAAAT GCCAGTTCTA TGACTATCCT TCGCCTGCCA TTCGTGAGCT TCGGGAACTC
CTTCATTTGA AGCACACGCT CAAACAGGAG GAACATCGCA TCAAAACCCG TATCAGAAAC
AACTTGCTTG CACAGTTCTT TCCTGAAATG GATCAGTTTA TGACGACCTG CCAGCAGGAC
ACGTTAGCGG TTATTGGAAC CTGTTGCTCT CCCGAGCAGA TTGCAACATT GGATTATGAG
TCGTTCTTTG CCAAAGTTGT CACCGTGTAC AAAGGGAAAC GACAGGAAGA GCATCTGCTT
CGGATCTGGC AGTGTGCCCG AGCATCCATT GGTTGCCTGG CGGGTAATGC GCCAATCTAT
GAGGGAAAGG TGCTCATTGA TCAGTTGCTC CACCTACGCC AGATTATAAA AGAACTTGAC
GAACAGATTG CAACATTGTG TTCAGGATTT GAAGAGTATC CTTGTCTGTT GAGTATTCCC
GGTATTGGCC CTGCTATTTC AGCAACCATT TTGGCAGCTA TCGGTAATCC CTACCGGTTC
GATACGACAA AACAGGTCAT CAAACTTGCC GGCCTTGATT TAAGCGCCTC TCGCAGCGGG
CGATCCGCAG TGAATGCAAC ACCGATTATT TCCAAAAGAG GGCAGGCTGA ACTGCGCTAT
GCGCTCTGTC AGGCGGCACT GGTGGCAGGA TCACGCAATA CGTTTTTCCG GTGCTGGTTT
GCCAAAAAAT TGCAGGGACG TGAGCGTGAA CGAGGGATCG TGGGAATTCT CAGGGTCAAA
CTGGCAGCAA AACTACTCGT TATTGCCTGG ACTATGATGA AGAAGAAAGA AATGTTTGCT
TATGAGCGAC TGAACAACTG CTGA
|
|---|
| Protein sequence | MQTETERLAA YRQLRTGIRG SEKHLIAGID IAKDKHYAFF GTATGKTLCK QFTFPNSNEG
FELLCSKAET LRLQHQLQQV VIGVEPTANY HKPLADHLVR HGLLVVQVSG VAVKKNRELL
DGRWDKHDRK DAANIADLIA QGKCQFYDYP SPAIRELREL LHLKHTLKQE EHRIKTRIRN
NLLAQFFPEM DQFMTTCQQD TLAVIGTCCS PEQIATLDYE SFFAKVVTVY KGKRQEEHLL
RIWQCARASI GCLAGNAPIY EGKVLIDQLL HLRQIIKELD EQIATLCSGF EEYPCLLSIP
GIGPAISATI LAAIGNPYRF DTTKQVIKLA GLDLSASRSG RSAVNATPII SKRGQAELRY
ALCQAALVAG SRNTFFRCWF AKKLQGRERE RGIVGILRVK LAAKLLVIAW TMMKKKEMFA
YERLNNC
|
|---|
| |