| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1108 |
|---|
| Symbol | |
|---|
| ID | 6458992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1217383 |
|---|
| End bp | 1218150 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642725103 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002015788 |
|---|
| Protein GI | 194333928 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.298542 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACT CTGACAGAGC CTTGAGCATA GAGGCAAATG AGCTGACGAA ATGCTTCGGC
TCTTTCTGTG CCGTCGATCG GCTCTCTTTT GGGGTGAACA GAGGAGAGAT CTTCGGTTTT
CTCGGTGCAA ACGGTGCAGG AAAGACAACG GCTATCAGAA TGCTCTGCGG CCTGCTTGAG
CCATCTTCGG GAAGGGCATC TGTCGCCGGT TTCGATGTAG GTTCCATGGC CGAAAAGGTC
AAACAGAACA TCGGCTATAT GAGTCAGCGT TTCTCGCTCT GCGACGATCT TACGGTACGA
GAAAATATAA GGTTTTACGG GGGCATCTAC GGCCTCTGTG ACCGCGATAT CAAGGCTCGA
ACCGGAGAGA TGCTCCAACG TCTCGATCTT GCATCGTCTG CCGATGTCCG TCTCGGTTCT
CTTCCTCCCG GGTGGAAACA GAAACTCGCG TTTTCAGTCG CCATGGTTCA TAATCCTGAA
ATCGTCTTTC TCGACGAACC GACCGGCGGT GTCGATCCGG TGACGAGACG ACGATTCTGG
GAACTGATCT ACGAGGCAGC GTCAAGAGAC GTGACCATCT TCGTTACAAC TCATTACATG
GATGAAGCGG AGTATTGCGA TCGGGTTTCG ATTATGGTAG ACGGCAGGAT AGCGGCCCTC
GATTCGCCAC GTCATCTCAA AGAAACGTTT GACGTTCCAT CCATGAACGA GGTTTTTCTC
CGGCTTGCAC GAAGCACCGG TGATGAAAAG AGGGAGGAGC GGCAATGA
|
|---|
| Protein sequence | MTNSDRALSI EANELTKCFG SFCAVDRLSF GVNRGEIFGF LGANGAGKTT AIRMLCGLLE
PSSGRASVAG FDVGSMAEKV KQNIGYMSQR FSLCDDLTVR ENIRFYGGIY GLCDRDIKAR
TGEMLQRLDL ASSADVRLGS LPPGWKQKLA FSVAMVHNPE IVFLDEPTGG VDPVTRRRFW
ELIYEAASRD VTIFVTTHYM DEAEYCDRVS IMVDGRIAAL DSPRHLKETF DVPSMNEVFL
RLARSTGDEK REERQ
|
|---|
| |