Gene Paes_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0572 
Symbol 
ID6459270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp615257 
End bp615823 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content50% 
IMG OID642724571 
Producthypothetical protein 
Protein accessionYP_002015275 
Protein GI194333415 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.316463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGG TTGATTCTCC TAATGATCGC AGATCTTCAC GTAAAGGCAG CCGTCAGAGT 
AAACGTCTCG GTTTTCATAT TGATATGACG CCGATGGTGG ATGTGGCGTT CCTGCTGCTG
ACGTTCTTCA TGCTGACAAC GACCTTCGGC AAGCCCAATA CCATGGAGAT CAATATTCCG
CCAGAGAGCG GAGAGGTCAA GATTGCCGAA AACAACGTTA TGACATTCCG TATCGTTGAA
GACGGTTATG CGTACTGGTC GATCGGCGAT CAGACTCCGA CCCGGATCAG CCTGTACGAC
GAAGGCCGTG AACGCGGAGC AATGTCGCTC GGAAAGGAGC TTCGTCTCAT GCTCCGTCAG
CAGACCGCCT TGAACGCTAA GTTGGTAATT ATTGTCAAAA TCAGCGACAG GGCCAAGTAC
AAGTACCTTG TCGATCTTAT TGATGAGTTC AATCTTCTTC AGATCGACCG TTTCAGCCTC
GATGATTTTA CCGATACTGA CGCGCATGTG ATCAGTGCAT TCGGATCGGC TAACAACACC
GTCAGGGGGG AGAGCAGTGA ATCTTGA
 
Protein sequence
MGLVDSPNDR RSSRKGSRQS KRLGFHIDMT PMVDVAFLLL TFFMLTTTFG KPNTMEINIP 
PESGEVKIAE NNVMTFRIVE DGYAYWSIGD QTPTRISLYD EGRERGAMSL GKELRLMLRQ
QTALNAKLVI IVKISDRAKY KYLVDLIDEF NLLQIDRFSL DDFTDTDAHV ISAFGSANNT
VRGESSES