| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04472 |
|---|
| Symbol | |
|---|
| ID | 6304815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1291574 |
|---|
| End bp | 1293172 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642638588 |
|---|
| Product | inner membrane protein |
|---|
| Protein accession | YP_001912465 |
|---|
| Protein GI | 188575536 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.898006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGACCG AAGCGCTGGT ACTGCTGTCG AGTTTATTTT TTGCATTCGT CTGCAATCAG
CTCTTCTGGC GCACGGCCAT GGCCACGCAT CCGGGCAGCA TTGGATTTGG CATCTCGTTG
ATGGCGTTGC TGGTGGCCGT GCATGCGCTG CTGTTGGGCA TCGTGGTGTG GCGCTGGAAT
GCAAAGCCGC TGCTGACGCT GTTGCTGTTT ACCACCGCCC TGGCCGCGCA CTACATGGAC
AGCTACAACG TCTATCTGGA TGCGGACATG CTGCGCAACG TGCTGCATAC CGATCACAAG
GAATCGCGTG AGCTGCTCAC GCCGGGCCTG ATCCTGCCGC TGCTGTGCTA CTTCCTGATC
CCGAGCGCGC TGCTATGGCG CACGCGTCTG CGCGCGCGCA GCGTGGGCAA GGCGTTCCTA
GTGCGGGCAG GTTTTCTGCT GGTCGTGGCG CTGGTAGGTG CTGCGGGCAC CATGCTGTCA
TCGCAGGATA TTTCCGCATT GATGCGCAAC CATCGCGAAG TGCGCTACCT GGCCACGCCG
ATCAATTACA TCGTGGCACT GCGGCAGAAT CTCAAATCCG ATTCGCCGAT GAAGCGCGCG
CCCAAGCAGC CGATCGAACA CGACGCCACG GCCACTCCGC GTGCGCCGGG CAGCCGCCCG
CGTCTGTTGC TGGTGGTGCT GGGTGAAACC GCACGCGCGC AGAACTGGGG CCTCAACGGC
TATGCCCGCC AGACCACGCC GGAGCTGGCG CAGACCGGGG TGATCAACTT CCCGGACATG
CATTCGTGCG GCACCAGCAC CGAGGTCTCG GTGCCCTGCA TGTTCTCGCC GTACGGGCGT
CGCGATTACA ACGAGGACAT GATTCGCGGC CATCAGTCGT TCCTGCACGT GCTGGAACAC
GCCGGTATTT CGACGCTATG GCGCGACAAC CAGTCCGGCT GCAAGGGCGT GTGCGACGGG
TTGGAGCTCC AGACGCTGGA CGATGCGACC ACACCGGGTC TGTGCGCCGA TGGCCGCTGC
ATGGACGAGA TTTTGCTGAG CGACCTGGCC GCGCAGGTGC GCGCCAAGCC TGGCGACCGC
GTGGTGGTGC TGCATCAACT GGGTAGCCAC GGGCCGAGTT ACTTCGAACG TTACCCGGCG
CAGTTCGAAC GCTTCAAGCC CGTCTGCAAG ACCGCAGATC TGGGCAGCTG CAGCCGCCAG
GACATCGTCA ACGCCTACGA CAATTCGCTC CTGTACACCG ACCATTTCCT CAATCAGGCC
ATCTACACCC TGCGCGGTCT GCAGGACTAC GACACAACGA TGATCTATCT CTCCGATCAC
GGCGAATCGC TCGGCGAAAA AGGCCTGTAT CTGCATGGCG TGCCGTATGC CATTGCGCCC
AAGGAGCAGA CCCATGTGCC GATGGTGATG TGGTTCTCGC CGGAGTTCGC GCGCGATCGC
GGCCTGGATG AAGCCTGCCT GCGCCATCGT GCAGGGCAAT ACACCGATCA GGACGCGCTT
TTCTCGTCGG TACTGGGGTT GATGCAGGTC AAGACCAGCG TCTACGCGTC CGAGCGCGAT
CTGTTCGCCA AGTGCACAGG CACGACGACG CTGCGCTGA
|
|---|
| Protein sequence | MSTEALVLLS SLFFAFVCNQ LFWRTAMATH PGSIGFGISL MALLVAVHAL LLGIVVWRWN
AKPLLTLLLF TTALAAHYMD SYNVYLDADM LRNVLHTDHK ESRELLTPGL ILPLLCYFLI
PSALLWRTRL RARSVGKAFL VRAGFLLVVA LVGAAGTMLS SQDISALMRN HREVRYLATP
INYIVALRQN LKSDSPMKRA PKQPIEHDAT ATPRAPGSRP RLLLVVLGET ARAQNWGLNG
YARQTTPELA QTGVINFPDM HSCGTSTEVS VPCMFSPYGR RDYNEDMIRG HQSFLHVLEH
AGISTLWRDN QSGCKGVCDG LELQTLDDAT TPGLCADGRC MDEILLSDLA AQVRAKPGDR
VVVLHQLGSH GPSYFERYPA QFERFKPVCK TADLGSCSRQ DIVNAYDNSL LYTDHFLNQA
IYTLRGLQDY DTTMIYLSDH GESLGEKGLY LHGVPYAIAP KEQTHVPMVM WFSPEFARDR
GLDEACLRHR AGQYTDQDAL FSSVLGLMQV KTSVYASERD LFAKCTGTTT LR
|
|---|
| |