| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5238 |
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| Symbol | glpT |
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| ID | 1186923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5956864 |
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| End bp | 5958213 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396557 |
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| Product | glycerol-3-phosphate transporter |
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| Protein accession | NP_794969 |
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| Protein GI | 28872350 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter
[TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGGT TTTTCCGCCC CGCCAGGCAC CAGGCACCCC TCCCCGAAGA AAAAGTCGAT
AGCACCTATC GACGCCTGCG CTGGCAGATT TTCGCAGGCA TCTTTATCGG TTACGCCGGC
TACTATTTGC TGCGCAAGAA TTTCTCGCTG GCGATGCCGT ATCTGATCGA CGAAGGCTAC
ACGCGTGGCC AACTGGGCGT GGCGATGTCT GCCATTGCGA TTGCCTACGG CTTGTCAAAA
TTCCTCATGG GGATCATTTC CGACCGATCC AACCCGCGTT ACTTTCTGCC GTTCGGCCTG
CTGGTGTCTG CCGGGATCAT GTTCATCTTC GGCTTCGCGC CGTGGGCGAC GTCCAGTGTC
ACGATCATGT TCGTGCTGCT GTTCATCAAT GGCTGGGCAC AGGGCATGGG TTGGCCGCCG
AGCGGGCGGA CGATGGTGCA TTGGTGGTCG CAGAAAGAGC GCGGCGGTGT TGTGTCGGTG
TGGAACGTGG CGCACAACGT CGGCGGCGGC CTGATCGGTC CGCTGTTTCT GCTGGGTATG
GGCTGGACAA ACGACTGGCA TGCAGCGTTC TATGTGCCGG CGGCAGTTGC GCTGCTGGTG
GCGGTATTCG CCTTCGCCAC GATGCGTGAC ACTCCGCAAT CGGTGGGTTT GCCGCCCATC
GAGCACTACA AGAACGATTA CCCGGAAGGC TACGATGAGA GCCACGAGGA AGAATTCAGC
GCTCGGGAAA TCTTCGTCAA GTACGTGCTG CGCAACAAAT TCCTGTGGTA CATCGCCATG
GCCAACGTGT TCGTTTACCT GCTGCGCTAC GGCGTTCTGG ACTGGGCCCC GACCTACCTG
AAAGAAGCCA AGCACTTCAC GGTCGACAAG ACCTCATGGG CTTACTTTCT GTACGAGTGG
GCAGGTATTC CGGGCACGCT GCTGTGCGGC TGGATGTCGG ACAAGATCTT CAAGGGCAAT
CGCGGCCTGA CCGGCATGGT GTTCATGTTT CTGGTGACCA TCGCCACGCT GGTGTACTGG
CTGAACCCTG AAGGCAACCC GACCGTCGAC ATGATCGCGC TGGTGTCCAT CGGCTTCCTG
ATCTACGGCC CGGTGATGCT GATCGGCTTG CAGGCACTGG AACTGGCCCC CAAGAAGGCG
GCGGGCACGG CAGCGGGCTT TACCGGGCTG TTTGGCTATC TGGGCGGCTC TGTCGCGGCG
AGCGCTGCGA TGGGCTACAC GGTTGACCAC TTCGGCTGGG ATGGCGGCTT CGTGCTGCTG
ATCGGCGCGT GCATCCTGGC GATGGTGTTT CTTGCGCCAA CGCTGCGGCA CAAACAGGTC
GCCAGTACGT CCCGCGACAT CAAACGCTGA
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| Protein sequence | MFGFFRPARH QAPLPEEKVD STYRRLRWQI FAGIFIGYAG YYLLRKNFSL AMPYLIDEGY
TRGQLGVAMS AIAIAYGLSK FLMGIISDRS NPRYFLPFGL LVSAGIMFIF GFAPWATSSV
TIMFVLLFIN GWAQGMGWPP SGRTMVHWWS QKERGGVVSV WNVAHNVGGG LIGPLFLLGM
GWTNDWHAAF YVPAAVALLV AVFAFATMRD TPQSVGLPPI EHYKNDYPEG YDESHEEEFS
AREIFVKYVL RNKFLWYIAM ANVFVYLLRY GVLDWAPTYL KEAKHFTVDK TSWAYFLYEW
AGIPGTLLCG WMSDKIFKGN RGLTGMVFMF LVTIATLVYW LNPEGNPTVD MIALVSIGFL
IYGPVMLIGL QALELAPKKA AGTAAGFTGL FGYLGGSVAA SAAMGYTVDH FGWDGGFVLL
IGACILAMVF LAPTLRHKQV ASTSRDIKR
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