Gene PSPTO_5148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5148 
Symbol 
ID1186833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5860027 
End bp5860473 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content56% 
IMG OID637396467 
Productpolyhydroxyalkanoate granule-associated protein PhaI 
Protein accessionNP_794879 
Protein GI28872260 
COG category 
COG ID 
TIGRFAM ID[TIGR01837] poly(hydroxyalkanoate) granule-associated protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAG CGAACACGAA GAAAAAAATC GAAGACGAGC AAGCCTCCAC GCTTTCCGAC 
GTCAGGCTGT ATGCCCGCAA GATCTGGCTG GCCGGTCTGG GTGCCTATTC CCGTGTCAAC
GAGGAAGGCA CCCAGTACGT CAAGGCGCTG ATCAGAACTG GCGAGCAGAC CGAAAAGGAA
GTGCTCAAGA CGGTCGATGA AACACGTGTG GCCGCCAACA GCGAAATCGA ATCGATCAAG
GGTGAGGTGT CGGGCGTCAA GGGGCGTGTC GATGCGCAAT TAGGCAGAAT CGAGGGTGCT
TTCGACCGTC GCGTCGCAAA GGCCTTGAAC CGTATTGGAA TCCCGTCTAA ACATGATGTT
GACACGCTCT CTGCCAAGCT CGACGAGCTG ACGGCATTGC TTGAACGTGT CGTGCCTAAA
AAGCTCGAGC GCTCAGAGTC GAAATGA
 
Protein sequence
MARANTKKKI EDEQASTLSD VRLYARKIWL AGLGAYSRVN EEGTQYVKAL IRTGEQTEKE 
VLKTVDETRV AANSEIESIK GEVSGVKGRV DAQLGRIEGA FDRRVAKALN RIGIPSKHDV
DTLSAKLDEL TALLERVVPK KLERSESK