| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4585 |
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| Symbol | |
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| ID | 1186268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5180018 |
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| End bp | 5182453 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395924 |
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| Product | ATP-dependent protease, putative |
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| Protein accession | NP_794336 |
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| Protein GI | 28871717 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.560792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATT CTGTCGCAGC CAACCTACGC CTGGCGCCAA ACGCGCTGAC CCGTCCGTTT
TCCGCTGAGC AGTTCAGCTT TGCGACCACC CACGAGCTTG AACCCTTTCG CGGTGTACTT
GGCCAGGAGC GTGCCGTAGA AGCCTTGCAG TTTGGCGTTG CCATGCCGCG CCCCGGTTAC
AACGTGTTTG TCATGGGCGA GCCCGGCACT GGCCGCTTTT CGTTCGTCAA ACGCTACCTC
AAGGCCGAAG GCAAGCGCAT GCAGGCGCCT TCGGACTGGG TGTACGTCAA TAATTTCGAT
GAGCCCCGTG AGCCCAAAGC CCTGGAATTG CCGCCCGGCA CCGCCCATGA GTTTATGGCC
GATATCGGCG GTTTGATCGA CAACCTGCTG GTGACCTTCC CGGCAGTGTT CGAGCACCCG
TCCTATCAGC AAAAGAAAAG CTCGATCGAC CGTGCGTTCA ATCAGCGCTA TGACCGCGCA
CTGGATGTGA TCGAGCGCCT GTCGCTGGAA AAGGACATTG CGCTGTATCG CGACAATTCC
AACATCGCGT TCACACCGAT GGCCGATGGC AAGGCGCTGG ACGAAGCCGA GTTCTCGCAG
TTGCCCGAGG CCGACCGTGA TCGTTTTCAC GAAGATATTT CCTCCCTTGA GGAACGTCTT
AACGAAGAGC TGGCCAGCCT GCCGCAGTGG AAACGCGAGT CCAATAACCA GCTGCGTCAA
CTCAATGAAG AAACCATTAC TCTGACCTTG CAGCCGTTGC TGGCGCCGCT TTCGGAAAAA
TACGCCGAAA ACGCCGCTGT CTGCGCGTAC CTGCAAGCGA TGCAGGTGTA CCTGCTCAAG
ACGCTGGTCG AGCAACTGGT CGACGACGCC AAGACCGATG CCCAGGCGCG CAAGTTGCTG
GAAGAGCAGT ACAGCCCGAG CCTGGTGGTC GGAAACACCC GTGACGGCGG CGCGCCGGTG
GTGTTCGAGC AGCATCCCAC GTACGACAAC CTGTTCGGGC GCATTGAATA CAGCACCGAT
CAGGGCGCGC TGTACACCAC CTACCGCCAG TTGCGCCCCG GCGCGCTGCA CCGTGCCAAC
GGTGGCTTCC TGATTCTGGA AGCGGAAAAA ATGCTCAGCG AGCCGTTTGT CTGGGATGCA
CTCAAACGTA CCCTGCAATC ACGCAAGCTG AAAATGGAGT CGCCGCTGGG TGAACTGGGC
CGTGTGGCAA CCGTGACGCT GACGCCGCAG GTGATCCCGT GGAACGTCAA GATCATCATC
ATTGGCTCCC GTTCGCTGTA TTACACCCTG CAAGACCTCG ATCCTGACTT TCAGGAGATG
TTCCGGGTGC TGGTCGATTT CGACGAAGAA ATCCCGATGG TCGACGAGAC GCTGGAGCAG
TTCGCGCAAT TGCTGAAAAC CCGTACCTCT GAGGAGGGCA TGGCGCCCCT GACCGCCGAT
GCGGTGGCAC GTCTGGCGAC CTACAGTGCC CGACTGGCCG AGCATCAGGG CCGTTTGTCG
GCGCGCATCG GGGACCTGTT TCAACTGGTC AGCGAAGCCG ACTTTATCCG CCAACTGGCC
AACGATGACA AGACCGACGC CGGGCACATC GAACGTGCGC TCAAGGCCAA GGCCACGCGC
ACCGGAAGGG TTTCTGCGCG GATTCTCGAT GACATGATGG CCGGCGTGAT CCTCATCGAT
ACCGACGGCG CAGCGGTCGG CAAGTGCAAC GGCCTGACGG TTCTGGAGGT CGGTGATTCG
GCGTTTGGTG TGCCGGCGCG TATTTCCGCG ACGGTCTATC CGGGTGGCAG CGGCATCGTC
GATATCGAGC GTGAAGTCAA TCTGGGCCAG CCGATCCACT CCAAGGGCGT GATGATCCTC
ACCGGTTACC TGGGTAGCCG TTACGCCCAA GAGTTCCCGC TGGCGATCTC CGCCAGTATC
GCGCTTGAAC AGTCCTACGG TTACGTGGAC GGCGACAGTG CGTCGCTGGG CGAGGCCTGC
ACGTTGATCT CGGCGCTGTC GCGCACGCCG CTCAAGCAGT GTTTTGCGAT TACCGGTTCC
ATCAACCAGT TCGGTGAAGT GCAGGCGGTG GGCGGGGTCA ACGAGAAGAT CGAAGGTTTC
TTCCGCCTTT GCGAAGCGCG TGGCCTGACG GGTGAGCAGG GCGCAATCAT CCCGCATGCC
AACGTCACTA CCCTGATGCT TGATGAACGC GTGGTTCAAG CCGTGCGTGA CGGGCAGTTC
CACATCTACG CAGTGCGTCA GGCTGACGAG GCCTTGAGCC TGCTGGTCGG TGAGCCCGCC
GGTGCGCCTG ACGAGAACGG CGAGTTTCCG CAAGGCAGCG TCAATGCGCG CGTGGTGGAG
CGCTTGCGTG ATATCGCCGA AATGCTCAGC GACGAAGACC TCAAGGAAGA GCTGGAAAAG
GAGCCTGCGC AACTGCAACC CGAGCTGAAA ATCTGA
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| Protein sequence | MPDSVAANLR LAPNALTRPF SAEQFSFATT HELEPFRGVL GQERAVEALQ FGVAMPRPGY
NVFVMGEPGT GRFSFVKRYL KAEGKRMQAP SDWVYVNNFD EPREPKALEL PPGTAHEFMA
DIGGLIDNLL VTFPAVFEHP SYQQKKSSID RAFNQRYDRA LDVIERLSLE KDIALYRDNS
NIAFTPMADG KALDEAEFSQ LPEADRDRFH EDISSLEERL NEELASLPQW KRESNNQLRQ
LNEETITLTL QPLLAPLSEK YAENAAVCAY LQAMQVYLLK TLVEQLVDDA KTDAQARKLL
EEQYSPSLVV GNTRDGGAPV VFEQHPTYDN LFGRIEYSTD QGALYTTYRQ LRPGALHRAN
GGFLILEAEK MLSEPFVWDA LKRTLQSRKL KMESPLGELG RVATVTLTPQ VIPWNVKIII
IGSRSLYYTL QDLDPDFQEM FRVLVDFDEE IPMVDETLEQ FAQLLKTRTS EEGMAPLTAD
AVARLATYSA RLAEHQGRLS ARIGDLFQLV SEADFIRQLA NDDKTDAGHI ERALKAKATR
TGRVSARILD DMMAGVILID TDGAAVGKCN GLTVLEVGDS AFGVPARISA TVYPGGSGIV
DIEREVNLGQ PIHSKGVMIL TGYLGSRYAQ EFPLAISASI ALEQSYGYVD GDSASLGEAC
TLISALSRTP LKQCFAITGS INQFGEVQAV GGVNEKIEGF FRLCEARGLT GEQGAIIPHA
NVTTLMLDER VVQAVRDGQF HIYAVRQADE ALSLLVGEPA GAPDENGEFP QGSVNARVVE
RLRDIAEMLS DEDLKEELEK EPAQLQPELK I
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