| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4533 |
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| Symbol | nhaA-1 |
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| ID | 1186216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5120036 |
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| End bp | 5121214 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395874 |
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| Product | sodium-proton antiporter NhaA |
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| Protein accession | NP_794286 |
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| Protein GI | 28871667 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACC CCACCCCCCG TACCGAATCC CCGAACGCGC TGGCGTTCAT CAAGCGCTTT
TTCGCCGCCG AAGCCGCTGG CGGTCTGATT TTGATGGCGG CTGCACTGGC TGCCCTGATC
GTCGCCAATT CGCCGTTGGC TGACAGCTAT TTTGCAGCGC TGCACACCGT GCTCGCCGGC
ATGTCGGTAG AGCACTGGAT CAACGACGGC CTGATGGCAA TCTTCTTCAT GCTGGTGGGC
CTTGAGATCA AACGCGAAAT GCTGGCAGGC CAGCTTGCGT CCTGGAGTCA GCGCGCCTTG
CCGGGCTTTG CGGCGCTGGG TGGCATGGTG GTGCCGGCGT TGATCTACGT GGCATTCAAC
TGGGGCCAGC CAGAAACCAT CGGCGGTTGG GCCATCCCGG CTGCGACCGA CATCGCCTTT
GCCCTGGGTG TGCTTTCTCT GCTCGGCAAA CGCGTACCGT TGTCCCTGAA AATCTTCCTG
TCGGCATTGG CGATTCTCGA TGACCTCGGC GCGGTATTGA TCATCGCGCT GTTCTACACC
AGTGATCTGT CCATCCCCAT GCTGCTGGCG GCGCTGGGCT CCATCGCCGT ACTCGTGGCG
CTGAACCGTC TGGGCGTTAA AAAGCTGTTG CCGTACCTGC TCATCGGCGC GCTGCTATGG
TTTTTCATGC TCCAGTCCGG CATTCACGCC ACCCTTGCAG GTGTGGCCCT GGCGCTGTGC
ATTCCGCTCG GCAAAGCTGA TGAAGAAGCC AGCTCGCCAC TGCTTCATCT GGAAGAGAAA
CTGCACCCGT GGGTCGCTTT TGCTGTGGTA CCGATCTTCG GGTTCGCCAA TGCGGGCGTG
TCGCTGGCCG GTATCACCGT CGACAAACTG GTAGACCCGG TGCCGCTGGG CGTCGCGCTG
GGGTTGTTGA TCGGCAAACA GGTCGGCATC TTCGCCCTTG CGGCACTGGC CATCCGCGCC
GGCCTGGCAC GCTTGCCTGA CGGCAGTAAT TGGGGTCAGC TTTACGGCGT CGCGGCACTG
TGCGGGATCG GTTTCACCAT GAGCCTGTTC ATCGGCGCAC TGGCCTTCCC GGGCGCGCCG
GCACTGGTGG ACGAGGTCAA GGTGGGCGTG TTGATCGGGT CGGTGTTTTC GGCGTTGTTG
GGGGTGGTGG TGTTGCGCAG GTTTGGGGCG CGGGGGTGA
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| Protein sequence | MHNPTPRTES PNALAFIKRF FAAEAAGGLI LMAAALAALI VANSPLADSY FAALHTVLAG
MSVEHWINDG LMAIFFMLVG LEIKREMLAG QLASWSQRAL PGFAALGGMV VPALIYVAFN
WGQPETIGGW AIPAATDIAF ALGVLSLLGK RVPLSLKIFL SALAILDDLG AVLIIALFYT
SDLSIPMLLA ALGSIAVLVA LNRLGVKKLL PYLLIGALLW FFMLQSGIHA TLAGVALALC
IPLGKADEEA SSPLLHLEEK LHPWVAFAVV PIFGFANAGV SLAGITVDKL VDPVPLGVAL
GLLIGKQVGI FALAALAIRA GLARLPDGSN WGQLYGVAAL CGIGFTMSLF IGALAFPGAP
ALVDEVKVGV LIGSVFSALL GVVVLRRFGA RG
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