Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4272 |
Symbol | |
ID | 1185953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4811663 |
End bp | 4813147 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637395615 |
Product | hypothetical protein |
Protein accession | NP_794029 |
Protein GI | 28871410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCA ACACTCTGGA AGAGCGCTTG GCGCAGTATG GATCGGGCGG ATATCTTTTC CTAGAAGCAT TCATTATCAA ACTCCTACAG GTCGAGGGAG AGCAGTTAGG ACAGAAAGTT GAGGGTCAAG ATAGCCATGT TTCGGCTTTT GACGCCATTG CTCCAAGTGG TATCGGTGAA ATTTCCTCAC CGCTGGTAGT GGAAATCGTA TTTTCTGTTT CCCGGTCAAA GCTCGATGCT ACCGTTGAAA AGTTTAGGGG GCATGCTAGT CGCGGTTACA GTTTGCTGAT TATTGCTCCG AAAATATCAG ATCTGAAGAA AAGTATTTAT ATCAACGAAG AAAATCCACG AGTGGACAGC CTTGTTTACC TCTGGGGGGA GAGTGAAGTC AACGAGCTGA TGCTGAAGCA TAAAGAGGCT GCAGAAACGC TCACCGCTAA TTTGTTTTCT CTGCGTCTAA AAATGGCTGC GGAGCGTACT GTCAGATCCT GGAAGGAAGA TCGTGATCAG TTAGTAAAAG CAGTTGCTGA AAAATACCGA GCGGGCAGAT TTTCTTTAAC TCTTGGCGCC GGAGTATCCA GTAGCGCTGG TTTGCCTGAC TGGAATACTC TGCTGAATTC CTTACTTGTT TCTATGCTAT CGCAGGAAAA TTTCGGTGGC CCCCACGGCG ATCCGGCTAA GGTGTCTGAA ATCGTCGCCA GGCTAATGGA AGTAGATGGG CCGTCTACAT TGATGTTAGC AAGGTATATC CGAAAAGGGC TTGCTGTGGG CTCACCTGTA GAACAGCAAG GGTTCGTTGA TGCGATTACC CATCAGCTTT ATTCTTTGCG TGACAAAAAA TTCCCAGTCG AATCAGAGCT GATTTCTTCT ATCGCGAAGC TATGTACCCC GACTCGAACC GGTGCCAACG TAAGATCTAT TTTGACCTAT AACTTTGATG ATTTCATTGA GAGGGCTCTG CTCTCTCGCT CGTTGGTACA TAAAAGTGTG TTCGAAGAAT TTGAGACACC AAGCGCTGAA GAACTACCTG TATACCATGT GCATGGTTTT TTACCGGAGG ATAGGCAGCG CTACTCCAAT CTGGATCGAT GCACCTTAGT TTTCTCTGAG GAAGGCTATC ATCAGATATA CCGTGACGCC TATCACTGGT CGAACTTGGT ACAGTTGAAC AGCTTCAAGG AAAGCTCATG CCTTATGATC GGTCTTTCAC TGACTGATCC GAATCTGCGC CGGCTATTGG AGATTGCGTC CAAATCGATC GAGGAGCCCA AACACTTCGC TTTCATGCGG CGTCTGACCT CCAAGAAATT TATGGAGGGG GCGAGTGGCA AGCCTCTCAA AATCTCAAAT GCTGTGGTTG AGCGCTTCCT TGAAAGACAC CATGCCACCA ACGAAGAGCT TATGCGTGAG CTAGGGGTGA GCGTCATCTG GTACGAGGAG TATGGCGACA TCCCGGAAAT TTTGAGCAAG ATACGCGCCG GGTGA
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Protein sequence | MDLNTLEERL AQYGSGGYLF LEAFIIKLLQ VEGEQLGQKV EGQDSHVSAF DAIAPSGIGE ISSPLVVEIV FSVSRSKLDA TVEKFRGHAS RGYSLLIIAP KISDLKKSIY INEENPRVDS LVYLWGESEV NELMLKHKEA AETLTANLFS LRLKMAAERT VRSWKEDRDQ LVKAVAEKYR AGRFSLTLGA GVSSSAGLPD WNTLLNSLLV SMLSQENFGG PHGDPAKVSE IVARLMEVDG PSTLMLARYI RKGLAVGSPV EQQGFVDAIT HQLYSLRDKK FPVESELISS IAKLCTPTRT GANVRSILTY NFDDFIERAL LSRSLVHKSV FEEFETPSAE ELPVYHVHGF LPEDRQRYSN LDRCTLVFSE EGYHQIYRDA YHWSNLVQLN SFKESSCLMI GLSLTDPNLR RLLEIASKSI EEPKHFAFMR RLTSKKFMEG ASGKPLKISN AVVERFLERH HATNEELMRE LGVSVIWYEE YGDIPEILSK IRAG
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