Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3852 |
Symbol | |
ID | 1185523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4363695 |
End bp | 4364615 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637395203 |
Product | hypothetical protein |
Protein accession | NP_793624 |
Protein GI | 28871005 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.527403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCTGTA TTCCTGCAAC CCGGGATCAG ACGGTGAGCA GCCATCCCGC TGGCACCCGC CAGAAGAAAC TGTTTTCACA AAACGACTAT CTGGCACCAC TGCCACTGCC CACCGGCCAG CAACCCGTCG ACTCACTCAA CATCATCTGG CGCAAAAACG AGGTTTACAT CGACATTGGC TGCTACAGCG TGGGGTCAGC AGTGATGGTG ATATGGCCGA TGATGATCAT GTTTATCAGT TTGGCCTACG GCTTGAACGA TATCGACTTG CTTTGGCTGG GGGTAATTAT CACCGGCATC CCCACCCTGA TGCTCATTCA CGGCCTACTC CGCCCAACAC CCCCACCCGT CCGCTTCAAT CGTCAGCGCC GCGAAGTCTG TGTGCCTCGT GACAACGGTG AATACTGGAT CGTCCCCTGG GAGTCAGTCA CAGCGGCTTC CACCCAGTGC TCCAGCATCG GTCAGGCGGG TCGCGTCACA ATGGGACTGC TTTTCATCGG ATTTGAAAAC CCTGACGCCG AAGCATCAGA AGACAACAAG CACTTCAGCA TGGGCTTCAA TTGCGGTGGG GGCGAAACTG CAATGGCACT TTGGGAGTGT ATGCGTAGTT ACATGGAAAT CGGACCGGAG GTGGTGCCTG AAAGCCGCGT CGGCGCGATG CCCTATGAAA AAACGCAAAT AGGATCAATC GTCACCAGTC TGCGCAAAGG TGATGTGTTC GATGTGCTGC ACGGCTTATT CTTCATCACG ATTCTGGGCA CCTATCTGGC GGAAAAGCTG CAAAACCTGA AGCTTTCACC CCCACCTGAC CTTGAATACC CAGACATCAT TGAATGGTCA AAATCTTTAC CACCCGAACA GTGGGCAACG CCCTCCCCTG AGCTACTGGC CGCTCTGGCG CGGCAGGCAG CGACATCATG A
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Protein sequence | MLCIPATRDQ TVSSHPAGTR QKKLFSQNDY LAPLPLPTGQ QPVDSLNIIW RKNEVYIDIG CYSVGSAVMV IWPMMIMFIS LAYGLNDIDL LWLGVIITGI PTLMLIHGLL RPTPPPVRFN RQRREVCVPR DNGEYWIVPW ESVTAASTQC SSIGQAGRVT MGLLFIGFEN PDAEASEDNK HFSMGFNCGG GETAMALWEC MRSYMEIGPE VVPESRVGAM PYEKTQIGSI VTSLRKGDVF DVLHGLFFIT ILGTYLAEKL QNLKLSPPPD LEYPDIIEWS KSLPPEQWAT PSPELLAALA RQAATS
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