Gene PSPTO_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3852 
Symbol 
ID1185523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4363695 
End bp4364615 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content55% 
IMG OID637395203 
Producthypothetical protein 
Protein accessionNP_793624 
Protein GI28871005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.527403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCTGTA TTCCTGCAAC CCGGGATCAG ACGGTGAGCA GCCATCCCGC TGGCACCCGC 
CAGAAGAAAC TGTTTTCACA AAACGACTAT CTGGCACCAC TGCCACTGCC CACCGGCCAG
CAACCCGTCG ACTCACTCAA CATCATCTGG CGCAAAAACG AGGTTTACAT CGACATTGGC
TGCTACAGCG TGGGGTCAGC AGTGATGGTG ATATGGCCGA TGATGATCAT GTTTATCAGT
TTGGCCTACG GCTTGAACGA TATCGACTTG CTTTGGCTGG GGGTAATTAT CACCGGCATC
CCCACCCTGA TGCTCATTCA CGGCCTACTC CGCCCAACAC CCCCACCCGT CCGCTTCAAT
CGTCAGCGCC GCGAAGTCTG TGTGCCTCGT GACAACGGTG AATACTGGAT CGTCCCCTGG
GAGTCAGTCA CAGCGGCTTC CACCCAGTGC TCCAGCATCG GTCAGGCGGG TCGCGTCACA
ATGGGACTGC TTTTCATCGG ATTTGAAAAC CCTGACGCCG AAGCATCAGA AGACAACAAG
CACTTCAGCA TGGGCTTCAA TTGCGGTGGG GGCGAAACTG CAATGGCACT TTGGGAGTGT
ATGCGTAGTT ACATGGAAAT CGGACCGGAG GTGGTGCCTG AAAGCCGCGT CGGCGCGATG
CCCTATGAAA AAACGCAAAT AGGATCAATC GTCACCAGTC TGCGCAAAGG TGATGTGTTC
GATGTGCTGC ACGGCTTATT CTTCATCACG ATTCTGGGCA CCTATCTGGC GGAAAAGCTG
CAAAACCTGA AGCTTTCACC CCCACCTGAC CTTGAATACC CAGACATCAT TGAATGGTCA
AAATCTTTAC CACCCGAACA GTGGGCAACG CCCTCCCCTG AGCTACTGGC CGCTCTGGCG
CGGCAGGCAG CGACATCATG A
 
Protein sequence
MLCIPATRDQ TVSSHPAGTR QKKLFSQNDY LAPLPLPTGQ QPVDSLNIIW RKNEVYIDIG 
CYSVGSAVMV IWPMMIMFIS LAYGLNDIDL LWLGVIITGI PTLMLIHGLL RPTPPPVRFN
RQRREVCVPR DNGEYWIVPW ESVTAASTQC SSIGQAGRVT MGLLFIGFEN PDAEASEDNK
HFSMGFNCGG GETAMALWEC MRSYMEIGPE VVPESRVGAM PYEKTQIGSI VTSLRKGDVF
DVLHGLFFIT ILGTYLAEKL QNLKLSPPPD LEYPDIIEWS KSLPPEQWAT PSPELLAALA
RQAATS