Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2726 |
Symbol | |
ID | 1184380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3024858 |
End bp | 3025568 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394095 |
Product | hypothetical protein |
Protein accession | NP_792532 |
Protein GI | 28869913 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCAGCA TCTACCTGAT ACGACATGGC CAGGCCTCAT TTGGTGCAGA CGATTACGAC GTGCTGTCGC CCGTCGGCAT TCGGCAGTCA CGGGTGCTGG GGGCGCACCT GGCCGGGCTG GGCCTGAGCT TCGATCGTTG CGTTTCCGGT GAACTGCGTC GTCAGCAGGA CACCGCGCAG CACACGCTGG CCCAGTACGC CGAAGCCGGC ATCGCTACCC CGCCTCTGGA AATCGACAGT GCTTTTGACG AATTCGACGC TGAAGCCGTC ATCAAGGCGC TGATCCCGGC CATGCTTCAG GACGAACCCG AAGCGCTGGA TATTCTGCGC AACGCCACCA CCAACCCCGC CGGATTTCAA CGCCTGTTCA GCCTCATTAC CGAGCGCTGG CTGTCAGGCA ACCACGACAC GCCGGGGCTG CAAAGCTGGC TGGGGTTCGT GGCGCGGGTC AAGGCAGGTC TCGACCGGAT TCTTCACGCA GCCGGCCCGC ATGAGCGTAT CGCCGTGTTC ACCTCCGGCG GCACGATCAC GGCCTTGCTG CATCTGATCA TGCAAATACC CGCAGCGAAG GCGCTCGACC TGCACTGGCA CATCGTCAAC ACTTCGCTGC ATCAGCTTAA ATTCAAAGGC AACGACGTTG CCCTGGCGTC TTTCAACAAT TACACGCACT TGCAACTGCA GAAGATGCCG GAACTCGTCA CTTATCGCTG A
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Protein sequence | MGSIYLIRHG QASFGADDYD VLSPVGIRQS RVLGAHLAGL GLSFDRCVSG ELRRQQDTAQ HTLAQYAEAG IATPPLEIDS AFDEFDAEAV IKALIPAMLQ DEPEALDILR NATTNPAGFQ RLFSLITERW LSGNHDTPGL QSWLGFVARV KAGLDRILHA AGPHERIAVF TSGGTITALL HLIMQIPAAK ALDLHWHIVN TSLHQLKFKG NDVALASFNN YTHLQLQKMP ELVTYR
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