Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2555 |
Symbol | phnC |
ID | 1184207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2823826 |
End bp | 2824659 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393926 |
Product | phosphonates ABC transporter, ATP-binding protein |
Protein accession | NP_792365 |
Protein GI | 28869746 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.205375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCAG CCATTCATGT CCAGGGCCTG AACAAGACCT TTTCAAACAA AAGCGCTTTG CTTGATCTGG CGTTGTCTAT ACAACCCGGT GAAATGGTTG CCCTGATTGG CGCTTCGGGC TCCGGCAAGT CGACCTTATT ACGCCACCTT GCGGGGCTGG CGTGCTGTGA TCGCAGCAAT GGCGGTCAGG TTCAGGTGCT GGGGCGCGAG GTTCAGTCTT CCGGGCGTCT CAATGGCCAG GTACGGCGCC TGCGCGCCGA CATCGGCTAC ATCTTTCAGC AGTTCAATCT GGTCAATCGT CTCAGCGTGA TGGACAACGT CCTGATCGGT TGCCTGGGCC GTATGCCGCG CTGGCGTGGC AGCTTGGGGT TGTTCAATCG TGAGGAAAAG CAGCGCGCCA TGGTCGCACT GGATCGGGTC GGGCTGGCTG ATCTGGCCGC TCAGCGTGCC TCGACGCTGT CGGGTGGCCA GCAGCAACGG GTGGCCATCG CCCGTGCGCT GACACAACGC GCCGAAGTGA TTCTGGCCGA TGAACCGATT GCCTCGCTCG ACCCCGAATC GGCCCGTCGG GTCATGGAAA TTCTTGCCGA CATCAACCGC CAGGATGGCA AGACAGTCGT CGTCACGCTG CATCAGGTCG ATTACGCCGT GCGCTATTGC CCGCGTGCCG TGGCCCTTAA AGGCGGGCGC ATTCATTACG ACGGTCCGGC GCAGGACCTC AGCAAGCCGT TCCTTAACGA CCTGTACGGC GCAGACGAAG ACGCGAGCCT GATGATCACC GAACGCAGCC GTCGCGTCCG GCAAAAGCCG CGTCTGGTAC TGGCTAAAGT CTGA
|
Protein sequence | MNAAIHVQGL NKTFSNKSAL LDLALSIQPG EMVALIGASG SGKSTLLRHL AGLACCDRSN GGQVQVLGRE VQSSGRLNGQ VRRLRADIGY IFQQFNLVNR LSVMDNVLIG CLGRMPRWRG SLGLFNREEK QRAMVALDRV GLADLAAQRA STLSGGQQQR VAIARALTQR AEVILADEPI ASLDPESARR VMEILADINR QDGKTVVVTL HQVDYAVRYC PRAVALKGGR IHYDGPAQDL SKPFLNDLYG ADEDASLMIT ERSRRVRQKP RLVLAKV
|
| |