Gene PSPTO_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2446 
Symbol 
ID1184098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2700804 
End bp2701694 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID637393821 
Productmetallo-beta-lactamase superfamily protein 
Protein accessionNP_792260 
Protein GI28869641 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGCA ACTCCCTGCT TGCCCTGTCC CTCGCCGCCC TGCCCCTCGC TACGTTGCTC 
CCGCTCGCCG CCCACGCTGC CGCCCCATTG GCGATCGAGG TCTACAACCC GGCCGAAAAA
GCCATCTTCC CGGTGTCCTC AGAACTGGTC ACCGGCAAGC ATGATGCGGT GCTGATCGAT
GCGCAGTTTC AGCGCAACGA TGCTCAGGCG CTGGTCGCGA AGATCAAGGC CACCGGCAAG
AAGCTCACCA CTGTCTATAT TAGCCACAGC GACCCGGATT ACTACTTCGG TCTGGAGGTC
ATACAAGCGG CTTTCCCCGA TGCAAAAATC GTTGCCAGCG CGCCTACCGT CAAAGCGATC
AAGGCCTCGA TGCAAGGCAA GCTTGCCTAC TGGAGCCCCA TCCTGAAAGA CAACGCCCCG
GAAAAACTGG TGCTGCCCGA AGTGCTGGAG GGTGATCACC TGACCCTCGA AGGTCAGCCG
CTGGAGATCA AAGGTTTGAC AGGCACGGCT CCGGAACGCA GCTATGTATG GATTCCATCG
CTCAAGGCCG TCGTCGGTGG CGTCGTGGTG TCCAGCGGCA TTCACGTTTG GGTAGCCGAC
ACACAGAGCC CCAAGTCCCG TCAGGACTGG CTCGCCACAC TCAAGGGCAT CGAAGCGCTG
AAACCGGCCA CCGTGATCCC AGGCCATTAC CTCGGGCAGA TTCCTCAAGG CACCCAAGCG
GTTGCCTTCA CCGCCGACTA TCTGAAATCC TTTGAACAAC AAGCGGCCAA AGCCAAGGAC
GCCAAGGCCC TGATCGATAC CATGCAGAAA GCCTGGCCGC AACTGGCCGA GCCCAGCTCG
CTGGAACTGA GTGCCAAGGT CATCAAGGGC GAGATGAAGT GGCCTAACTG A
 
Protein sequence
MLRNSLLALS LAALPLATLL PLAAHAAAPL AIEVYNPAEK AIFPVSSELV TGKHDAVLID 
AQFQRNDAQA LVAKIKATGK KLTTVYISHS DPDYYFGLEV IQAAFPDAKI VASAPTVKAI
KASMQGKLAY WSPILKDNAP EKLVLPEVLE GDHLTLEGQP LEIKGLTGTA PERSYVWIPS
LKAVVGGVVV SSGIHVWVAD TQSPKSRQDW LATLKGIEAL KPATVIPGHY LGQIPQGTQA
VAFTADYLKS FEQQAAKAKD AKALIDTMQK AWPQLAEPSS LELSAKVIKG EMKWPN