Gene PSPTO_2211 details

Gene Information

• Locus tag: PSPTO_2211
• Symbol: fabA
• ID: 1183862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 2436140
• End bp: 2436655
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637393592
• Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA
• Protein accession: NP_792032
• Protein GI: 28869413
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.274835
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAC AACACGCCTT TACCCGGGAA GACCTGCTGC GCTGCAGTCG CGGCGAGCTG 
TTCGGCCCAG GTAATGCGCA ACTGCCCGCC CCCAACATGC TGATGGTTGA TCGCATCACC 
CACATCAGCG AAGAAGGCGG CAAGTTCGGC AAAGGTGAAT TGGTCGCCGA ACTGGATATC 
AACCCGGACC TGTGGTTCTT TGCCTGCCAC TTCGAAGGCG ACCCGGTCAT GCCCGGCTGC 
CTGGGCCTGG ATGCCATGTG GCAACTGGTC GGTTTCTACC TCGGCTGGCA GGGTAATCCT 
GGCCGTGGCC GCGCCCTGGG TTCGGGCGAA GTGAAGTTTT TCGGTCAGGT GCTGCCTACT 
GCCAAAAAAG TCACCTATAA CATTCAAATC AAACGCACCA TGCGCGGCAA ACTGGTCCTG 
GCAATCGCCG AAGGCACCGT GAGCGTCGAT GGTCGCGAAA TCTACAGCGC CGAAGGCCTT 
CGCGTCGGTC TGTTTACTTC CACTGAAAAT TTCTAA 

 

Protein sequence

MTKQHAFTRE DLLRCSRGEL FGPGNAQLPA PNMLMVDRIT HISEEGGKFG KGELVAELDI 
NPDLWFFACH FEGDPVMPGC LGLDAMWQLV GFYLGWQGNP GRGRALGSGE VKFFGQVLPT 
AKKVTYNIQI KRTMRGKLVL AIAEGTVSVD GREIYSAEGL RVGLFTSTEN F