| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0180 |
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| Symbol | trkA |
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| ID | 1181788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 201325 |
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| End bp | 202698 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391557 |
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| Product | Trk system potassium uptake protein TrkA |
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| Protein accession | NP_790039 |
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| Protein GI | 28867420 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGATCA TCATTCTGGG TGCGGGTCAG GTGGGCGGTA CACTGGCCGA GCATCTGGCG
GGCGAAGCCA ACGACATCAC CGTGGTCGAC ACCGACGGCG ACCGCTTGCG CGATCTGGGT
GATCGCCTGG ACATCCGCAC CGTGCAGGGC AAAGGCTCGT ATCCGGCGGT GCTGCGCCAG
GCAGGTGCCG ACGACGCTGA CATGCTGGTC GCCGTGACCA GCAGCGACGA AGCCAACATG
ATCGCCTGCC AGGTGGCCCA CACGCTGTTT CACACACCGA CCAAGATCGC GCGCATCCGT
GAAGCGGCGT ACCTGACCCG CGCAGGCCTG TTCGACAAGA ACGCGATTCC GGTCGACGTG
CTGATCAGCC CGGAACAGGT GGTCACCAAT TACATCAAGC GCCTGATCGA GTACCCCGGC
GCGCTTCAGG TAATCGATTT CGCCGAAGGC AAGGCGCAGC TGGTCGCGGT CAAAGCCTAT
TACGGCGGGG CGCTTGTCGG TCAGCAACTG CGCCAGCTGC GCGCGCACAT GCCTAACGTC
GATACCCGTA TCGCAGCGAT CTACCGGCGC GACCGGGCGA TCCTGCCCAA AGGCGATACG
GTCATCGAAG CCGACGACGA GGTATTTTTC ATCGCCGCCA GGGCTGATAT TCGTGCGGTG
ATGGGCGAGC TGAGGCGTCT GGACGAGAAC TACAAACGCA TCGTCATCGC CGGCGGCGGC
AACATCGGCG AGCGTCTGGC CGAAGCCATC GAAAGCCGTT ATCAGGTCAA GATCATCGAA
GTGAACCCGG CGCGCTGCCG CTACCTGTCG GAGAACCTCG ACAGTACCGT GGTGCTGCAG
GGTAGCTCAT CGGACCGCGA CCTGCTGCTG GAAGAAAACA TCGGTAACAC CGACCTGTTT
CTGGCGCTGA CCAACGACGA CGAAGCCAAC ATCATGTCGT CACTGCTGGC CAAACGGCTG
GGCGCACGCA AGGTGATGAC GCTGATCAAC AACCCGGCCT ACGTTGATCT GGTCCAGGGC
GGCGAGATTG ACGTCGCGGT CAGCCCGCAA CTGGCAACCA TCGGCACATT GCTGGCCCAC
GTACGCCGGG GCGATATCGT CAGCGTTCAC TCTCTAAGGC GTGGCGCTGC CGAGGCCATT
GAGATCGTTG CCCACGGCGA CCCGAAATCC AGCAAGGTGG TCGGTCGCGC CATCAAGGAC
ATCAACCTGC CGACCGGTAC GGCGATTGGC GCGATCATCC GCGACGAACA GGTCCTCATC
GCCCACGACG TCACCCTGAT CGAATCCGGC GACCACGTGA TCATGTTTCT TGTGGATAAA
AAGTGCATTC GCGATGTGGA GCGGCTGTTT CAGGTAGGCC TGAGCTTTTT CTGA
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| Protein sequence | MKIIILGAGQ VGGTLAEHLA GEANDITVVD TDGDRLRDLG DRLDIRTVQG KGSYPAVLRQ
AGADDADMLV AVTSSDEANM IACQVAHTLF HTPTKIARIR EAAYLTRAGL FDKNAIPVDV
LISPEQVVTN YIKRLIEYPG ALQVIDFAEG KAQLVAVKAY YGGALVGQQL RQLRAHMPNV
DTRIAAIYRR DRAILPKGDT VIEADDEVFF IAARADIRAV MGELRRLDEN YKRIVIAGGG
NIGERLAEAI ESRYQVKIIE VNPARCRYLS ENLDSTVVLQ GSSSDRDLLL EENIGNTDLF
LALTNDDEAN IMSSLLAKRL GARKVMTLIN NPAYVDLVQG GEIDVAVSPQ LATIGTLLAH
VRRGDIVSVH SLRRGAAEAI EIVAHGDPKS SKVVGRAIKD INLPTGTAIG AIIRDEQVLI
AHDVTLIESG DHVIMFLVDK KCIRDVERLF QVGLSFF
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