Gene PSPTO_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0143 
Symbol 
ID1181751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp166389 
End bp166676 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content57% 
IMG OID637391520 
Producthypothetical protein 
Protein accessionNP_790002 
Protein GI28867383 
COG category[R] General function prediction only 
COG ID[COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR02443] conserved hypothetical metal-binding protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA CACCGGCAGT CATTACCAAG AAACGCTTCA TCGCCGGGGC TGTATGCCCG 
GCGTGCAGCG AGCCTGACAA ACTCATGATG TGGAGCGAAA ACGACGTGCC GCACCGCGAG
TGCGTCGGCT GCGGGTACAG CGATACGCTC AACGAACAAG GTATTTCGAT ACCCAAAGAG
CTGGGCACGC GGGTTAACAA GGCGGTGGTC AAACCGGCGG ATCCGAAGGT CCAGGGCGTG
CAGTTTTTTC CGAATCCAAA GTTGAAGAAG CCGGTTGATC TGGGATGA
 
Protein sequence
MTDTPAVITK KRFIAGAVCP ACSEPDKLMM WSENDVPHRE CVGCGYSDTL NEQGISIPKE 
LGTRVNKAVV KPADPKVQGV QFFPNPKLKK PVDLG