Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0143 |
Symbol | |
ID | 1181751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 166389 |
End bp | 166676 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637391520 |
Product | hypothetical protein |
Protein accession | NP_790002 |
Protein GI | 28867383 |
COG category | [R] General function prediction only |
COG ID | [COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain |
TIGRFAM ID | [TIGR02443] conserved hypothetical metal-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATA CACCGGCAGT CATTACCAAG AAACGCTTCA TCGCCGGGGC TGTATGCCCG GCGTGCAGCG AGCCTGACAA ACTCATGATG TGGAGCGAAA ACGACGTGCC GCACCGCGAG TGCGTCGGCT GCGGGTACAG CGATACGCTC AACGAACAAG GTATTTCGAT ACCCAAAGAG CTGGGCACGC GGGTTAACAA GGCGGTGGTC AAACCGGCGG ATCCGAAGGT CCAGGGCGTG CAGTTTTTTC CGAATCCAAA GTTGAAGAAG CCGGTTGATC TGGGATGA
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Protein sequence | MTDTPAVITK KRFIAGAVCP ACSEPDKLMM WSENDVPHRE CVGCGYSDTL NEQGISIPKE LGTRVNKAVV KPADPKVQGV QFFPNPKLKK PVDLG
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