Gene PSPA7_6155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_6155 
Symbol 
ID5358947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6359182 
End bp6360498 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content66% 
IMG OID640815199 
ProductMFS family transporter 
Protein accessionYP_001351466 
Protein GI152985754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000158885 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCCG CGAATGCTCC CGAGGCGCCG GCCCAGCGTC CATTGACCCG CAGCGACTAC 
AAGACCCTGT CCCTCTCCGC CCTGGGCGGA GCGCTGGAGT TCTACGACTT CATCATCTTC
GTGTTCTTCG CCACCGTGGT CGGCAAGCTG TTCTTCCCGG CGGACATGCC GGAATGGTTG
CGTCAGTTGC AAACCTTCGG CCTGTTCGCT GCCGGCTACC TGGCGCGGCC GCTGGGCGGC
GTGATCATGG CCCACTTCGG CGACCTGCTC GGGCGCAAGC GCATGTTCAC CCTGAGCATC
TTCATGATGG CGGTGCCGAC CCTGATCATG GGGTTGTTGC CGACCTACGC GCAGATCGGC
ATCTGGGCGC CGCTGGCGCT GCTCCTGCTG CGGGTGGTCC AGGGTGCCGC CATCGGTGGC
GAGGTGCCGG GCGCCTGGGT GTTCGTCGCC GAGCATGTAC CGGCGCGGCA TGTCGGCTAC
GCCTGCGGGA CCCTGACGTC GGGGCTGACC GCGGGCATCC TGCTGGGCTC GCTGGTGGCC
ACCGCGATCA ACAGCCTCTA TAGCGCCGAA GAAGTACAGG GCTACGCCTG GCGGATACCC
TTCCTGCTCG GCGGGGTGTT CGGCCTGTTC TCGGTCTATC TGCGCCGCTG GCTGCACGAG
ACGCCGGTAT TCGCCGAACT GCAGCAGCGC AAGGCGCTGG CCGAGGAGGT GCCGTTGAAG
GCGGTGGTCC GCGACCATCG GGGAGCGGTG CTGGTGTCGA TGCTGTTGAC CTGGGTGCTA
TCGGCGGCGA TCGTGGTGGT CATCCTGATG ACCCCCACCG TGCTCCAGAG CGTGTACGGC
TTCGACGCCG CCACGGCGCT GAAGGCCAAC AGCCTGGCGA TCGTCTGCCT GACCGTCGGC
TGCATCGTCG CCGGGCGCAT GGCCGACCGC TTCGGTGCCG GGCTGACCTT CGTCACCGGC
AGCGTGCTGC TGGCGCTGGT GTCCTGGAGT TTCTATGGCA ACCTGAAGGC GCACCCGGAC
TGGCTCTTTC CTCTATATGC ACTGACCGGC TTCTTCGTCG GCATCGTCGG CGCCGTACCC
TACGTCATGG TCAACGCGTT TCCGCCGGTG GTGCGTTTCT CCGGCCTGTC CTTTTCCTAC
AATCTGGCCT ACGCCATCTT CGGCGGGCTG ACACCGATGG CCGTTGCCCT GCTGCTCAAG
CAGAGCCCGA TGGGGCCGGC TTATTATGTG GTGACCCTGT GCCTGGTCGG CTTCCTCGTG
GGGCTCTATC TGCTGGCGCA GAAAAAGCCG GCTGGCGAGG CGGTTTCGCT GGGCTGA
 
Protein sequence
MPSANAPEAP AQRPLTRSDY KTLSLSALGG ALEFYDFIIF VFFATVVGKL FFPADMPEWL 
RQLQTFGLFA AGYLARPLGG VIMAHFGDLL GRKRMFTLSI FMMAVPTLIM GLLPTYAQIG
IWAPLALLLL RVVQGAAIGG EVPGAWVFVA EHVPARHVGY ACGTLTSGLT AGILLGSLVA
TAINSLYSAE EVQGYAWRIP FLLGGVFGLF SVYLRRWLHE TPVFAELQQR KALAEEVPLK
AVVRDHRGAV LVSMLLTWVL SAAIVVVILM TPTVLQSVYG FDAATALKAN SLAIVCLTVG
CIVAGRMADR FGAGLTFVTG SVLLALVSWS FYGNLKAHPD WLFPLYALTG FFVGIVGAVP
YVMVNAFPPV VRFSGLSFSY NLAYAIFGGL TPMAVALLLK QSPMGPAYYV VTLCLVGFLV
GLYLLAQKKP AGEAVSLG