| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1621 |
|---|
| Symbol | |
|---|
| ID | 5357018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1655715 |
|---|
| End bp | 1656680 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640810674 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_001347005 |
|---|
| Protein GI | 152985175 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0517761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCCGC GCCTTCTTCT ATTGCCTTTC CTGCTCAGCA GCCTGCCGGC GCTGGCGGTG
ACCTTCCAGA CGCGCCTGGA CAGCGTCGAA TGGAAGGTCG AGGGCGACCA GTTCGAATGC
CGCCTGTCGC AGCCGGTGGC GAACTTCGGC GTCGGCGAGT TCGTGCGTCG CGCTGGCGAG
CAAGCCACCT TCCGCCTGAA ACCGGACGCC CAGTGGCTGG GACGCGGTTC GGCGACCCTG
CTCGCCGCCG CTCCGCCGTG GCGGCCGGGG CAGGGCGACA TCAACCTCGG CCAGGTCAGC
GTCGGCAGCG GCGAGGTGCC GTTCAACAGC AGCCAGCAAC AGGCCGGCCG CCTGCTGACC
GGCCTGCTCG AAGGACGCAG CCCGCTGGTC CGCCATCGCA CCTGGCAGGG CGACCGCCTG
GAGGTGCGTC TGCTGCCGGC GCGTTTCGCC GGCGTCTACA ACCAGTACCT GGCGTGCACC
GCCAAGCTGC TGCCGGTGAA CTTCGACCAG GTCAAGCTGG CCCAGGTCGG CTTCCCCGAC
GGCGGCACCG CGCTGAACGA CGTGGCGCGG GCCAAGCTGG ACATCATCCT GCAACTGCTC
AAGGCCGATC CGAGCATCAA CCGCATCGAG CTGGACGGCC ACTCCGACAA CAGCGGCAAC
CGCCTGACCA ACCGCGACCT GTCGCGCCGC CGCGCGCTGG CGGTGCAGGA GTACCTGAAG
GGCAACGGCG TGCCGGAGAG CCAGATCAAC GTGCGCTTCT ACGGCGAACG CTATCCGCTG
GTAGCCAATA ACAGCGCCGC CAACCGTGCG CGCAACCGTC GGGTGACCGT GCATCTGGCG
CGCGAGGCGG TGGTCGAGCC GGCGCCGGAA ACGCCCAGGG CCGAGGACAA GCCGCCGGTG
CCGGCGGCAG AACCTGCCGC GCCGAAGGCT CCGGCCGCCT CGCTCCAGGG AAAACCCACG
GTTTGA
|
|---|
| Protein sequence | MQPRLLLLPF LLSSLPALAV TFQTRLDSVE WKVEGDQFEC RLSQPVANFG VGEFVRRAGE
QATFRLKPDA QWLGRGSATL LAAAPPWRPG QGDINLGQVS VGSGEVPFNS SQQQAGRLLT
GLLEGRSPLV RHRTWQGDRL EVRLLPARFA GVYNQYLACT AKLLPVNFDQ VKLAQVGFPD
GGTALNDVAR AKLDIILQLL KADPSINRIE LDGHSDNSGN RLTNRDLSRR RALAVQEYLK
GNGVPESQIN VRFYGERYPL VANNSAANRA RNRRVTVHLA REAVVEPAPE TPRAEDKPPV
PAAEPAAPKA PAASLQGKPT V
|
|---|
| |