| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1480 |
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| Symbol | |
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| ID | 5356526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1500724 |
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| End bp | 1501932 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640810533 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001346864 |
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| Protein GI | 152988711 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCA CACTCGACAA CCTGCAGCCC TACCCCTTCG AGAAACTCCG CGCCCTGCTC
GGCGGCACCC AGCCGCCGGC GACGCTGAAG CCGATCGCAC TGTCCATCGG CGAGCCCAAG
CACCGCTCGC CGAGCTTCGT CGCCGAGACC CTGGCGGAGA ACCTGGACCA GCTTGCGGTC
TACCCGACCT CCCTCGGCCT GCCGGCCCTG CGCGAAGCCA TCGCGCACTG GTGCGAGCGG
CGTTTCTCGG TGCCGGCCGG CTGGCTGGAT GCGGCGCGCC ATGTGCTGCC GGTGAACGGC
ACCCGCGAGG CGCTGTTCGC CTTCACCCAG ACCGTGGTCC GCCGCAGCGA GCCCGGCGAG
GCCCCCGGCC TGGTGGTCAG CCCGAACCCG TTCTACCAGA TCTACGAAGG CGCGGCGCTG
CTCGCCGGGG CCGAACCGCA CTACCTGCCG TGCCGCGAGG AAAACGGCTT CAATCCTGAC
TTCGACGCAG TCGACGAGGC GACCTGGCAG CGCTGCCAGA TTCTCTTCCT CTGCTCGCCC
GGCAACCCCA CCGGCGCCCT GGTGCCGCTG GAGACCCTGA AGAAGCTGAT CGCCCTGGCC
GATCGCTACG ACTTCGTGAT CGCCGCCGAC GAGTGCTACA GCGAACTCTA CTTCGACGAA
AACGCCCCGC CGCCCGGCCT GCTCAACGCC TGTGCCGAAC TGGGCCGCAC GGATTTCAGC
CGCTGCGTGG TGTTCCACAG CCTGTCCAAG CGCTCCAACC TGCCCGGCCT GCGCTCGGGC
TTCGTCGCCG GCGACGCGGA AATCCTGAAG AAATTCCTCC TCTACCGCAC CTACCACGGC
TGCGCCATGC CGGTGCAGAC CCAACTGGCG AGCATCGCCG CCTGGAACGA CGAGGTCCAT
GTGCGCGCCA ACCGCAGCCT GTACCGCGAG AAGTTCGACG CCGTGCTGGC GATCCTCGAC
GGTGTGCTCG ACGTACAGCG CCCGGACGGC AGTTTCTACC TGTGGGCGCG CACCCCGGTG
GACGACACCG TCTTCACCCG CGAGCTGTTC GAGCGGCAGC ACGTGACGGT GGTGCCGGGT
TCCTACCTGT CTCGCGAGGT GGACGGCGAG AACCCCGGCG CCAACCGCGT GCGCATGGCC
CTGGTGGCTC CGCTGGCCGA GTGCGTCGAG GCCGCCGAGC GCATCCGCGA CTACCTGCGG
GCGCGCTGA
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| Protein sequence | MNTTLDNLQP YPFEKLRALL GGTQPPATLK PIALSIGEPK HRSPSFVAET LAENLDQLAV
YPTSLGLPAL REAIAHWCER RFSVPAGWLD AARHVLPVNG TREALFAFTQ TVVRRSEPGE
APGLVVSPNP FYQIYEGAAL LAGAEPHYLP CREENGFNPD FDAVDEATWQ RCQILFLCSP
GNPTGALVPL ETLKKLIALA DRYDFVIAAD ECYSELYFDE NAPPPGLLNA CAELGRTDFS
RCVVFHSLSK RSNLPGLRSG FVAGDAEILK KFLLYRTYHG CAMPVQTQLA SIAAWNDEVH
VRANRSLYRE KFDAVLAILD GVLDVQRPDG SFYLWARTPV DDTVFTRELF ERQHVTVVPG
SYLSREVDGE NPGANRVRMA LVAPLAECVE AAERIRDYLR AR
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