| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0070 |
|---|
| Symbol | |
|---|
| ID | 5357824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 76186 |
|---|
| End bp | 78540 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640809124 |
|---|
| Product | site-specific recombinase, phage integrase family protein |
|---|
| Protein accession | YP_001345466 |
|---|
| Protein GI | 152986166 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCA AGCCTTTCTC CAAGTCTGCA CTTGAGTCGC GAGAACGACC GACCCTCCAG
CGAAAGCTCC CAGAAAACAC CCCCCAAGCG ATTCAAGAAA GAAGCACTGC TAGGGGACAA
GTCGATGTTT CAGCTCAAGG GTTGCTTGTC CGAAACAAGA CTACTGGCAC AAGGGAATAC
GTCCGTGACT TCACAGATCT TGTCACTGAG TATCCGCACC ATAAATTAAT TGTCCAGCAG
TTACTTATAG GTGCGCAGCT CCATTCCGCA AAGAGATTGA TCACATATCA ATCCCATCAA
GACATCTATT ACTCAATTCA AGAGTTTGTG CTGTTTCTTA ACAGCGCTGA GCCGATCAAT
AAATCAGTCA AAGGTGTTGC TGATGTCGAT GGGCAGGTAT GCGCGAATTT TAGGTCATTT
CTAATTCGTT CGTATCCAGG TCGCACCGTA AATAGAAAAA GATACGGCGC ATTAAAAAAT
ATCTTCCTTT CGTTGAAAAA TAAATATAAA GGGCAGGGCT GGGTCGGCAA AGGGTTTGAA
TGGCCGACTG GACCGGGGAT GAACGAGCAA ATAACAGAAG GATACAGCAG GGAGATTCAT
AATAAGCTTG TGGAGGGATG CCTGATCGAT ATTAAGTTTA TTATGAAGTG GATGGAGAGT
TACAACAGTG TAGTGGAAGG CGAGAAGCCA ATTCTGGCAT ACGATCTTTC ATTAGAAAAC
TTGATGTTTG ATCTGGTTGT AAAAGAGCAA ACTAAAAGAT CCAACGGGTC AATCAAGGCG
ACACACATTA AAGGGTTTGA GTGGGTTATA CGCTCCACTG GAGATGTTAA AGAATACATA
CGGGCAAATG GAATAAGTAT AGAGAGGTTT CTGGGCATTT ACCGAGCCCG CGCCCATGAA
CTGGCGGCTA AAGGTCGCCC TGTAGTTGGT ACTGAGGTCA GTGAACGGGG GATGGTGTAT
GGCTGTGATC GAGAAGAATC TGGGCGAATT GCAACTGCAA ATGTAGGAAG ACTTTATCCT
GATTGGCCTA TGCAAGTGAG CTTCGAGGAA GCTGGACATC TCTTTTCCAC TGAGTGGAGT
AAAAACACCG CTCACGGAAC AAACAAAAAA TATTCTACGC TGGAAAAAAG ATTACGGTCG
GCCTTGATGT ATATGAAGGT TGGGCCAGAG CACCTACCCT ATGAAGTAGG TCAAATGGCA
TACTTCAGCA GAGTAGCCTT CACAATGGGA ACTATATTCC CATTCTTTCT CTTCGTGATG
TTGCAGACGG GCTGGAACTT TGAGGTCGTG GTATCGATAA GCGATAACCT AGACGACCAC
ATTGAGGAGG ACCTTCTGGA TGATGACTAT GTGATTATTT ATGGGTACAA GGGACGGTCC
AACAAAAGCC AAATGCATAG ATCAAACAAG CGAGATAAGT TTGGCACGTA TCAGATCTTG
CGCTTTGTTG CCGCTGAAGT AACCAAGCAT TTCTCGTCGC CTCATTATTT AAAGGGTAAA
TTATTTCAGT GTGTCATTTC GAAGAATCTG TGGAATAAGT TTGGCCGCTT ATGCACGCCG
GTGACCACTA CGAATTTTGG GCACGCATCA ACGGAGTTTC TACATCGCCA CCGCATAAAA
TTGGATACGG ATACCAAATC CCCCAGAATT GAAACGAAAC GTCTTCGAAC TACTTACGAA
ACTCGACGGA GAGAACAGGG TTTAGATATA GACGAAGTTT CGACAATGAT GGGGCATTCG
GATATCGATA CCACAGTGAA TCATTATGAT AGTGACTGGG GGTCGGCAGA AATATTAAAT
GGGCGTCTAA GAAAGATTCA GAGAAAGCAT GAAGAAGATT TTAGGCGTTA CTCAGCAAAT
CTTCTTACAG ATGTGTCTTT GGTTGAGCTG CGTGAAGCCA CTCTACGCTG CGGTAGCAAA
GAAAAACTAC GGTCAGTTGT TGCACCATTA GTCGGCAGGC TGAATTCTTC TGAAGATTCG
GTAATACAGT TGCTTTCTCC GGAAGGTCAG ACATTCATTG CAAGTTGTCT AAATTCAAGA
CGACCAGATT GGCCAGGCGC TGAAAGTTTT CTTAGGACGG ATACGCCTTG CAACTACTTC
AATCGTTGCC CGTTATGCTC ACAGTGTGTG ATCTTCAAAG AAGCATTACC TTTTATTGCA
AGAAGAATTT CCGACCTTGA CGGTCTGAGG GAGCGGTTAA ATCCCTTAGA ATGGGAGAAA
AGCTATCGCG CTGAGTATTT AGCGTGGAAG GGGGTTCTAG AGGGCTGGGG GGATCCGATT
GAGGTTGCTG AGGCAATAGA TCGATCAGTA CATAACGATT TTGCACTGCC ATTGACAATG
ATAGGGCTCT CATGA
|
|---|
| Protein sequence | MPRKPFSKSA LESRERPTLQ RKLPENTPQA IQERSTARGQ VDVSAQGLLV RNKTTGTREY
VRDFTDLVTE YPHHKLIVQQ LLIGAQLHSA KRLITYQSHQ DIYYSIQEFV LFLNSAEPIN
KSVKGVADVD GQVCANFRSF LIRSYPGRTV NRKRYGALKN IFLSLKNKYK GQGWVGKGFE
WPTGPGMNEQ ITEGYSREIH NKLVEGCLID IKFIMKWMES YNSVVEGEKP ILAYDLSLEN
LMFDLVVKEQ TKRSNGSIKA THIKGFEWVI RSTGDVKEYI RANGISIERF LGIYRARAHE
LAAKGRPVVG TEVSERGMVY GCDREESGRI ATANVGRLYP DWPMQVSFEE AGHLFSTEWS
KNTAHGTNKK YSTLEKRLRS ALMYMKVGPE HLPYEVGQMA YFSRVAFTMG TIFPFFLFVM
LQTGWNFEVV VSISDNLDDH IEEDLLDDDY VIIYGYKGRS NKSQMHRSNK RDKFGTYQIL
RFVAAEVTKH FSSPHYLKGK LFQCVISKNL WNKFGRLCTP VTTTNFGHAS TEFLHRHRIK
LDTDTKSPRI ETKRLRTTYE TRRREQGLDI DEVSTMMGHS DIDTTVNHYD SDWGSAEILN
GRLRKIQRKH EEDFRRYSAN LLTDVSLVEL REATLRCGSK EKLRSVVAPL VGRLNSSEDS
VIQLLSPEGQ TFIASCLNSR RPDWPGAESF LRTDTPCNYF NRCPLCSQCV IFKEALPFIA
RRISDLDGLR ERLNPLEWEK SYRAEYLAWK GVLEGWGDPI EVAEAIDRSV HNDFALPLTM
IGLS
|
|---|
| |