Gene PSPA7_0048 details

Gene Information

• Locus tag: PSPA7_0048
• ID: 5354877
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 58884
• End bp: 59570
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640809102
• Product: putative lipoprotein
• Protein accession: YP_001345444
• Protein GI: 152988492
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1462] Uncharacterized protein involved in formation of curli polymers

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCATC GCGCCAAGAA AGCACTACTG CCGCTCCTCG CCGCCGCCAC CCTGGCCGGC 
CTGGCGGGCT GCGCCACCGA GACCTCCACC GCGTTGCCGG TACAGCAGGT CGAGAGCGTC 
AACCGACCCT ACAGCGGCGT GCGTTCGCCG ATCGCGGTGG GCAAGTTCGA CAACCGCTCC 
AGCTACATGC GCGGGATCTT TTCCGATGGC GTCGACCGCC TCGGCGGCCA GGCCAAGACC 
ATTCTCATCA CCCACCTGCA GCAGACCAAT CGCTTCAACG TGCTGGACCG CGACAACATG 
AGCGAGATCC AGCAGGAAGC GGCGATCAAG GGCCAGGCCC AGCGCCTGAA GGGTGCCGAC 
TACGTGGTGA CCGGCGACGT CACCGAGTTC GGCCGCAAGG AAGTCGGCGA CCGCCAGCTG 
TTCGGCATCC TCGGCCGCGG CAAGTCGCAG ATCGCCTACG CCAAGGTGGC GCTGAACATC 
GTCAACATCT CTACCTCGGA GGTCGTCTAT TCGACCCAGG GCGCTGGCGA GTACGCCCTG 
TCCAACCGCG AGGTGATCGG CTTCGGCGGC ACCGCCAGCT ACGACTCGAC CCTCAACGGC 
AAGGTCCTCG ACCTGGCCAT GCGCGAGGCG GTGAACAAGT TGGTCAACGC GGTCGATAGC 
GGCGCCTGGA AGCCACAGAA CCAATAA 

 

Protein sequence

MSHRAKKALL PLLAAATLAG LAGCATETST ALPVQQVESV NRPYSGVRSP IAVGKFDNRS 
SYMRGIFSDG VDRLGGQAKT ILITHLQQTN RFNVLDRDNM SEIQQEAAIK GQAQRLKGAD 
YVVTGDVTEF GRKEVGDRQL FGILGRGKSQ IAYAKVALNI VNISTSEVVY STQGAGEYAL 
SNREVIGFGG TASYDSTLNG KVLDLAMREA VNKLVNAVDS GAWKPQNQ