Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0018 |
Symbol | sun |
ID | 5357200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 18646 |
End bp | 19950 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640809072 |
Product | ribosomal RNA small subunit methyltransferase B |
Protein accession | YP_001345414 |
Protein GI | 152985582 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.577785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGC GTCTCGCCGC CTGCCAGGCG CTGGCGGCGG TGCTCGCCGG ACGCGCCTCG CTGTCCGGCG CGCTGCCGGC GCAACTGGAC AAGGTCGCCC CGCGCGACCG CGGCCTGACC CAGGAGCTGG CCTTCGGCGC GGCGCGCTGG CAGCCGCGCC TTCAGGCGCT GGCCGCCCGC CTGTTGCAGA AGCCGTTCAA GGCCGCCGAC AACGATATCC ACGCCCTGCT GCTGATCGGC CTGTACCAGC TGCTCTACAC GCGGGTACCG CCGCACGCGG CGATCGGCGA GACCGTCGGT TGCGCCGACA AGCTGAAGAA GGGCTGGGCC AAGGGCGTAC TCAATGCCGT GCTGCGCCGC GCCCAGCGCG AAGGCGAGAC ACTGCTGGCC GAGGTCGACC GCGACCCGTC GGCGCGCCTG GGCCACCCGC GCTGGCTGCT GAAGGCCTTG CAGCAGGCCT GGCCGGAACA GCTCGAGGCG CTTTGCGCGG CGAACAACGC GCACCCGCCG ATGACCCTGC GGGTCAACCG CCGCCACGGC GAGCGCGATA CCTACCTGGC CGAACTCGCC GAAGCCGGGA TCGAGGCCCG CGCCTGCGAC TACAGCCGCG ACGGCATCCA GCTCGCCGCG CCGCGCGACG TACGCGAGCT GCCGGGCTTC GCCGAGGGCC GCGTGAGCGT CCAGGACGAA GCCGCGCAAC TGGCTGCCGA ACTCCTTGAA AGCGCACCCG GGCAGCGCGT CCTCGATGCC TGCTGCGCCC CTGGCGGCAA GACCTGCCAT CTGCTGGAAA TCCAGCCGGA ACTGGGCGAA GTGGTCGCCG TCGATCTCGA ACAGAGCCGC CTGCTGCGGG TCCGGGAAAA CCTCCAGCGC CTGGGCCTCG AGGCCCGCCT GGTCGCCGCC GACGCGCGGG CGACGGGGGA GTGGTGGGAT GGCCAGCCGT TCCAGCGCAT CCTCCTCGAC GCCCCTTGTT CGGCCACCGG TGTGATCCGT CGCCACCCTG ACATCAAGCT GGCGCGCAAG CCGGACGACA TCGCCGCCCT GGCGCAGCTG CAAGGCGAGC TGCTCGACGC CCTGTGGCCG ACCCTGGAGG TCGGCGGCGT GCTGGTCTAC GCCACCTGCT CGGTGATGCC TTCGGAAAAC AGCGACGGTA TCGCCGCCTT CCTCGCCCGC ACCCCAGGTG CCCGCGAACT GGACCTGCCA GGTCCATGGG GCATGAAACA GGCCCATGGA CGCCAGCTGC TACCGCAGGT GGACGGCCAC GATGGCTTCT ACTATGCCAA GCTGATCAAG ATATCCGCCC GTTGA
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Protein sequence | MNPRLAACQA LAAVLAGRAS LSGALPAQLD KVAPRDRGLT QELAFGAARW QPRLQALAAR LLQKPFKAAD NDIHALLLIG LYQLLYTRVP PHAAIGETVG CADKLKKGWA KGVLNAVLRR AQREGETLLA EVDRDPSARL GHPRWLLKAL QQAWPEQLEA LCAANNAHPP MTLRVNRRHG ERDTYLAELA EAGIEARACD YSRDGIQLAA PRDVRELPGF AEGRVSVQDE AAQLAAELLE SAPGQRVLDA CCAPGGKTCH LLEIQPELGE VVAVDLEQSR LLRVRENLQR LGLEARLVAA DARATGEWWD GQPFQRILLD APCSATGVIR RHPDIKLARK PDDIAALAQL QGELLDALWP TLEVGGVLVY ATCSVMPSEN SDGIAAFLAR TPGARELDLP GPWGMKQAHG RQLLPQVDGH DGFYYAKLIK ISAR
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