Gene PSPA7_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_0018 
Symbolsun 
ID5357200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp18646 
End bp19950 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content71% 
IMG OID640809072 
Productribosomal RNA small subunit methyltransferase B 
Protein accessionYP_001345414 
Protein GI152985582 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.577785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGC GTCTCGCCGC CTGCCAGGCG CTGGCGGCGG TGCTCGCCGG ACGCGCCTCG 
CTGTCCGGCG CGCTGCCGGC GCAACTGGAC AAGGTCGCCC CGCGCGACCG CGGCCTGACC
CAGGAGCTGG CCTTCGGCGC GGCGCGCTGG CAGCCGCGCC TTCAGGCGCT GGCCGCCCGC
CTGTTGCAGA AGCCGTTCAA GGCCGCCGAC AACGATATCC ACGCCCTGCT GCTGATCGGC
CTGTACCAGC TGCTCTACAC GCGGGTACCG CCGCACGCGG CGATCGGCGA GACCGTCGGT
TGCGCCGACA AGCTGAAGAA GGGCTGGGCC AAGGGCGTAC TCAATGCCGT GCTGCGCCGC
GCCCAGCGCG AAGGCGAGAC ACTGCTGGCC GAGGTCGACC GCGACCCGTC GGCGCGCCTG
GGCCACCCGC GCTGGCTGCT GAAGGCCTTG CAGCAGGCCT GGCCGGAACA GCTCGAGGCG
CTTTGCGCGG CGAACAACGC GCACCCGCCG ATGACCCTGC GGGTCAACCG CCGCCACGGC
GAGCGCGATA CCTACCTGGC CGAACTCGCC GAAGCCGGGA TCGAGGCCCG CGCCTGCGAC
TACAGCCGCG ACGGCATCCA GCTCGCCGCG CCGCGCGACG TACGCGAGCT GCCGGGCTTC
GCCGAGGGCC GCGTGAGCGT CCAGGACGAA GCCGCGCAAC TGGCTGCCGA ACTCCTTGAA
AGCGCACCCG GGCAGCGCGT CCTCGATGCC TGCTGCGCCC CTGGCGGCAA GACCTGCCAT
CTGCTGGAAA TCCAGCCGGA ACTGGGCGAA GTGGTCGCCG TCGATCTCGA ACAGAGCCGC
CTGCTGCGGG TCCGGGAAAA CCTCCAGCGC CTGGGCCTCG AGGCCCGCCT GGTCGCCGCC
GACGCGCGGG CGACGGGGGA GTGGTGGGAT GGCCAGCCGT TCCAGCGCAT CCTCCTCGAC
GCCCCTTGTT CGGCCACCGG TGTGATCCGT CGCCACCCTG ACATCAAGCT GGCGCGCAAG
CCGGACGACA TCGCCGCCCT GGCGCAGCTG CAAGGCGAGC TGCTCGACGC CCTGTGGCCG
ACCCTGGAGG TCGGCGGCGT GCTGGTCTAC GCCACCTGCT CGGTGATGCC TTCGGAAAAC
AGCGACGGTA TCGCCGCCTT CCTCGCCCGC ACCCCAGGTG CCCGCGAACT GGACCTGCCA
GGTCCATGGG GCATGAAACA GGCCCATGGA CGCCAGCTGC TACCGCAGGT GGACGGCCAC
GATGGCTTCT ACTATGCCAA GCTGATCAAG ATATCCGCCC GTTGA
 
Protein sequence
MNPRLAACQA LAAVLAGRAS LSGALPAQLD KVAPRDRGLT QELAFGAARW QPRLQALAAR 
LLQKPFKAAD NDIHALLLIG LYQLLYTRVP PHAAIGETVG CADKLKKGWA KGVLNAVLRR
AQREGETLLA EVDRDPSARL GHPRWLLKAL QQAWPEQLEA LCAANNAHPP MTLRVNRRHG
ERDTYLAELA EAGIEARACD YSRDGIQLAA PRDVRELPGF AEGRVSVQDE AAQLAAELLE
SAPGQRVLDA CCAPGGKTCH LLEIQPELGE VVAVDLEQSR LLRVRENLQR LGLEARLVAA
DARATGEWWD GQPFQRILLD APCSATGVIR RHPDIKLARK PDDIAALAQL QGELLDALWP
TLEVGGVLVY ATCSVMPSEN SDGIAAFLAR TPGARELDLP GPWGMKQAHG RQLLPQVDGH
DGFYYAKLIK ISAR