| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5197 |
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| Symbol | ubiF |
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| ID | 1042443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5929155 |
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| End bp | 5930378 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148596 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | NP_747298 |
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| Protein GI | 26991873 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGC GCGCAGATCT GTTGATTGTC GGTGCCGGTA TGGTGGGCAG CGCCCTGGCC
TTGGCGTTGC GCCACAGTGG CCTGCAAATT TTGTTGCTCG ATGGTGGCCC GCTGACGGTC
GTACCCTTCG ATGCCCAGGC CCCGTTCGAG CCGCGTGTCA GCGCGCTATC GGCGGCCAGC
CAGCGCATCC TCGAGCGCCT TGGCGCCTGG GACGGCATTG CCCAGCGGCG CGCCACGCCG
TATTCCGACA TGCATGTGTG GGATGGCAGC GGCACCGGGC AGATTCACTT CTCGGCGGCC
AGTGTGCATG CCCAGGTGCT CGGCCATATC GTCGAGAACC GGGTGGTGCA GGACGGCCTG
CTGGAGCGCC TGCACGACAG CGACATCGGC CTGCTGGCCA ATGCGAGGCT GGAGCAATTG
CGTCGCTCGG GCGATGAGTG GCTGCTGACC CTGGCGGATG GCCGGCAACT GCGGGCACCG
TTGGTGATCG CTGCCGACGG TGCCAATTCG GCGGTGCGGC GTCTGGCCGG CTGCGAAACC
CGCGAGTGGG ATTACCTGCA CCATGCCATT GTCACCAGCG TGCGTTGCAG CGCCGGGCAC
CAGGCCACGG CCTGGCAGCG CTTCACTGAC GAAGGTCCGC TGGCGTTCCT GCCGTTGACC
CGCGATGGCC AGCAGGACTG GTGCTCGATC GTCTGGTCGA CCACCCCGGA GCATGCCGAG
CAGTTGATGG CGATGGATGA AGCGGCCTTC CTGCAGGCCC TGGAGCGGGC CTTCGAAGGG
CGTCTGGGCG AGGTGCTTCA GGCCGACCCA CGGGTGTGCG TGCCGCTGCG CCAGCGACAC
GCCAAGCGCT ACGTGGATGA AGGCCTGGTC TTGATCGGTG ATGCTGCACA CACCATTCAC
CCACTGGCCG GGCAGGGTGT GAACCTCGGC TTCCTCGACG CGGCGGTGCT GGCTGAGGTG
CTGGTCAATG CTTGCGAGCG CGGTGAGAGG CTGGCCGATG TGAAGGTGCT GAGCCGTTAC
GAGCGCCGGC GTATGCCACA CAACCTGGCG TTGATGGCGG CGATGGAGGG CTTCGAGAGG
TTGTTCCAGG CCGATCCGCT GCCGTTGCGC TGGTTGCGCA ACAGCGGGTT GAAGCTGGTG
GAGCAGATGC CGGAGGCCAA GGCGCTGTTT GTGCGCCAGG CGTTGGGTTT GAGTGGTGAC
CTGCCGGATC TGGCCAAGGC TTGA
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| Protein sequence | MEMRADLLIV GAGMVGSALA LALRHSGLQI LLLDGGPLTV VPFDAQAPFE PRVSALSAAS
QRILERLGAW DGIAQRRATP YSDMHVWDGS GTGQIHFSAA SVHAQVLGHI VENRVVQDGL
LERLHDSDIG LLANARLEQL RRSGDEWLLT LADGRQLRAP LVIAADGANS AVRRLAGCET
REWDYLHHAI VTSVRCSAGH QATAWQRFTD EGPLAFLPLT RDGQQDWCSI VWSTTPEHAE
QLMAMDEAAF LQALERAFEG RLGEVLQADP RVCVPLRQRH AKRYVDEGLV LIGDAAHTIH
PLAGQGVNLG FLDAAVLAEV LVNACERGER LADVKVLSRY ERRRMPHNLA LMAAMEGFER
LFQADPLPLR WLRNSGLKLV EQMPEAKALF VRQALGLSGD LPDLAKA
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