Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4872 |
Symbol | |
ID | 1043432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5538628 |
End bp | 5540928 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148273 |
Product | hypothetical protein |
Protein accession | NP_746977 |
Protein GI | 161378117 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.783093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.109803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAG CCAAACCACT CTACGACTAT CCCAAGTACT GGGCCGAATG CTTCGGACCA GCACCTTTCC TGCCAATGAG CAGGGAGGAG ATGGATCTGC TCGGCTGGGA TTCCTGCGAC ATCATCATCG TGACCGGTGA TGCCTACGTC GACCATCCGT CGTTCGGCAT GGCCATCATT GGCCGTCTGC TGGAAGCCCA AGGCTTCCGC GTGGGCATCA TCGCCCAGCC GAACTGGCAG TCGAAAGACG ACTTCATGAA GCTCGGCGAA CCGAACCTGT TCTTCGGTGT GGCCGCCGGC AACATGGACT CGATGATCAA CCGCTACACC GCGGACAAGA AGATCCGTTC CGACGATGCC TACACCCCTG GTGGCCTGGC CGGCAGCCGT CCGGACCGTG CCAGCCTGGT GTATAGCCAG CGCTGCAAGG AGGCCTACAA GCATGTGCCG ATCGTGCTCG GCGGCATCGA GGCTTCGCTG CGCCGCATCG CCCACTACGA CTACTGGCAG GACAAGGTTC GTCACTCGAT CCTGATCGAT GCCAGCGCCG ACATCCTGCT GTTCGGCAAC GCCGAGCGTG CGGTGGTCGA GGTGGCCCAG CGCCTGTCCA ACGGGGAGAA GATCGAGACC ATCACCGACG TGCGCGGCAC CGCCTTCGTG CGCCGCGATA CCCCGCAGGG CTGGTACGAG ATCGACTCCA CCCGTATCGA CCGCCCGGGG CGCGTTGACA AGATCATCAA CCCGTACGTG AACACCCAGG ACACCCAGGC CTGCGCCATC GAGCAGGCCA AGGGCGACCA GGAAGACCCG AACGAAGCCA AGGTGGTGCA GATTCTCGAC AGCCCGGCCG TGACCCGGGA AAAGTCGGTG ATCCGCCTGC CATCGTTCGA AAAGGTGCGT AACGACCCGG TGCTCTATGC CCATGCCAAC CGCGTGCTGC ACCTGGAGAC CAACCCGGGC AATGCTCGCG CGCTGGTGCA GAAGCACGGT GAAGTGGATG TGTGGTTCAA CCCGCCACCC ATCCCCATGA GCACCGAGGA AATGGACTAC GTGTTCGGCA TGCCATACGC CCGTGTGCCG CACCCGGCCT ATGGCAAGGA GCGCATCCCG GCCTACGAGA TGATCCGTTT CTCGGTGAAC ATCATGCGTG GCTGCTTCGG TGGCTGTACC TTCTGCTCGA TCACCGAGCA CGAAGGCCGC ATCATCCAGA ACCGCTCGCA CGAGTCGATC CTGCACGAAA TCGAAGAGAT GCGTGACAAG GTGCCGGGCT TCACCGGCGT GGTCTCGGAC CTTGGCGGGC CGACTGCCAA CATGTACCGC ATCGCCTGCA AAAGCCCCGA AATCGAGAAG TACTGCCGCA AGCCGTCGTG CGTATTCCCG GGTATCTGCG AAAACCTCAA TACCGACCAC AGCTCGTTGA TCGAGCTTTA CCGCAAGGCC CGTGCCTTGC CGGGTGTGAA AAAGATCCTG ATTGCTTCCG GCCTGCGCTA CGACCTGGCG GTGGAATCGC CGGAGTACGT CAAGGAACTG GTCACCCACC ACGTTGGCGG CTACCTGAAG ATTGCCCCGG AGCACACCGA GCGTGGCCCC CTGGACAAGA TGATGAAGCC GGGTATCGGC ACCTACGACC GCTTCAAGCG CATGTTCGAG AAGTTCTCGA AAGAAGCGGG CAAGGAGCAG TACCTGATCC CGTACTTCAT TGCCGCGCAC CCCGGTACCA CCGACGAAGA CATGATGAAC CTGGCCCTGT GGCTGAAGGG CAACGGCTTC CGCGCCGACC AGGTACAGGC GTTCTACCCG TCGCCAATGG CCTCGGCCAC GGCCATGTAC CACTCAGGCA AGAACCCGCT GCGCAAGGTG ACCTACAAGA GCGAAGGGGT GGAGATCGTC AAGAGCGACG AGCAACGCCG TCTGCACAAG GCGTTCTTGC GCTACCACGA CCCGAAGGGC TGGCCGATGC TGCGTGAAGC GCTGCAGCGT ATGGGCCGAG CCGACCTGAT CGGGCCGGGC AAGCACCAAC TGATCCCGCT GCACCAGCCG CAGACCGATA CTTATCAGAG CGCGCGCCGG AAGAACTCGA CCCCGGCGGG GAGCCACAAG GTGGGCAAGG ACCAGAAGAT CCTGACCCAG CACACCGGCC TGCCGCCGCG TGGCAGCGAT GGCAGCAAGC CGTGGGACAA GCGCGAAAAG GCCAAGGCCG AGGCGTTTGC GCGTAACCAG CAGGCTGCCA AGGAGCGCAA AGAGGCGAGC AAGGGTGGCA AGGGCAACAA GAAGCCGCGT CAGCCTGTCA TTCCGCGTTA A
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Protein sequence | MQAAKPLYDY PKYWAECFGP APFLPMSREE MDLLGWDSCD IIIVTGDAYV DHPSFGMAII GRLLEAQGFR VGIIAQPNWQ SKDDFMKLGE PNLFFGVAAG NMDSMINRYT ADKKIRSDDA YTPGGLAGSR PDRASLVYSQ RCKEAYKHVP IVLGGIEASL RRIAHYDYWQ DKVRHSILID ASADILLFGN AERAVVEVAQ RLSNGEKIET ITDVRGTAFV RRDTPQGWYE IDSTRIDRPG RVDKIINPYV NTQDTQACAI EQAKGDQEDP NEAKVVQILD SPAVTREKSV IRLPSFEKVR NDPVLYAHAN RVLHLETNPG NARALVQKHG EVDVWFNPPP IPMSTEEMDY VFGMPYARVP HPAYGKERIP AYEMIRFSVN IMRGCFGGCT FCSITEHEGR IIQNRSHESI LHEIEEMRDK VPGFTGVVSD LGGPTANMYR IACKSPEIEK YCRKPSCVFP GICENLNTDH SSLIELYRKA RALPGVKKIL IASGLRYDLA VESPEYVKEL VTHHVGGYLK IAPEHTERGP LDKMMKPGIG TYDRFKRMFE KFSKEAGKEQ YLIPYFIAAH PGTTDEDMMN LALWLKGNGF RADQVQAFYP SPMASATAMY HSGKNPLRKV TYKSEGVEIV KSDEQRRLHK AFLRYHDPKG WPMLREALQR MGRADLIGPG KHQLIPLHQP QTDTYQSARR KNSTPAGSHK VGKDQKILTQ HTGLPPRGSD GSKPWDKREK AKAEAFARNQ QAAKERKEAS KGGKGNKKPR QPVIPR
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