Gene PP_4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4872 
Symbol 
ID1043432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5538628 
End bp5540928 
Gene Length2301 bp 
Protein Length766 aa 
Translation table11 
GC content62% 
IMG OID637148273 
Producthypothetical protein 
Protein accessionNP_746977 
Protein GI161378117 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.783093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.109803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAG CCAAACCACT CTACGACTAT CCCAAGTACT GGGCCGAATG CTTCGGACCA 
GCACCTTTCC TGCCAATGAG CAGGGAGGAG ATGGATCTGC TCGGCTGGGA TTCCTGCGAC
ATCATCATCG TGACCGGTGA TGCCTACGTC GACCATCCGT CGTTCGGCAT GGCCATCATT
GGCCGTCTGC TGGAAGCCCA AGGCTTCCGC GTGGGCATCA TCGCCCAGCC GAACTGGCAG
TCGAAAGACG ACTTCATGAA GCTCGGCGAA CCGAACCTGT TCTTCGGTGT GGCCGCCGGC
AACATGGACT CGATGATCAA CCGCTACACC GCGGACAAGA AGATCCGTTC CGACGATGCC
TACACCCCTG GTGGCCTGGC CGGCAGCCGT CCGGACCGTG CCAGCCTGGT GTATAGCCAG
CGCTGCAAGG AGGCCTACAA GCATGTGCCG ATCGTGCTCG GCGGCATCGA GGCTTCGCTG
CGCCGCATCG CCCACTACGA CTACTGGCAG GACAAGGTTC GTCACTCGAT CCTGATCGAT
GCCAGCGCCG ACATCCTGCT GTTCGGCAAC GCCGAGCGTG CGGTGGTCGA GGTGGCCCAG
CGCCTGTCCA ACGGGGAGAA GATCGAGACC ATCACCGACG TGCGCGGCAC CGCCTTCGTG
CGCCGCGATA CCCCGCAGGG CTGGTACGAG ATCGACTCCA CCCGTATCGA CCGCCCGGGG
CGCGTTGACA AGATCATCAA CCCGTACGTG AACACCCAGG ACACCCAGGC CTGCGCCATC
GAGCAGGCCA AGGGCGACCA GGAAGACCCG AACGAAGCCA AGGTGGTGCA GATTCTCGAC
AGCCCGGCCG TGACCCGGGA AAAGTCGGTG ATCCGCCTGC CATCGTTCGA AAAGGTGCGT
AACGACCCGG TGCTCTATGC CCATGCCAAC CGCGTGCTGC ACCTGGAGAC CAACCCGGGC
AATGCTCGCG CGCTGGTGCA GAAGCACGGT GAAGTGGATG TGTGGTTCAA CCCGCCACCC
ATCCCCATGA GCACCGAGGA AATGGACTAC GTGTTCGGCA TGCCATACGC CCGTGTGCCG
CACCCGGCCT ATGGCAAGGA GCGCATCCCG GCCTACGAGA TGATCCGTTT CTCGGTGAAC
ATCATGCGTG GCTGCTTCGG TGGCTGTACC TTCTGCTCGA TCACCGAGCA CGAAGGCCGC
ATCATCCAGA ACCGCTCGCA CGAGTCGATC CTGCACGAAA TCGAAGAGAT GCGTGACAAG
GTGCCGGGCT TCACCGGCGT GGTCTCGGAC CTTGGCGGGC CGACTGCCAA CATGTACCGC
ATCGCCTGCA AAAGCCCCGA AATCGAGAAG TACTGCCGCA AGCCGTCGTG CGTATTCCCG
GGTATCTGCG AAAACCTCAA TACCGACCAC AGCTCGTTGA TCGAGCTTTA CCGCAAGGCC
CGTGCCTTGC CGGGTGTGAA AAAGATCCTG ATTGCTTCCG GCCTGCGCTA CGACCTGGCG
GTGGAATCGC CGGAGTACGT CAAGGAACTG GTCACCCACC ACGTTGGCGG CTACCTGAAG
ATTGCCCCGG AGCACACCGA GCGTGGCCCC CTGGACAAGA TGATGAAGCC GGGTATCGGC
ACCTACGACC GCTTCAAGCG CATGTTCGAG AAGTTCTCGA AAGAAGCGGG CAAGGAGCAG
TACCTGATCC CGTACTTCAT TGCCGCGCAC CCCGGTACCA CCGACGAAGA CATGATGAAC
CTGGCCCTGT GGCTGAAGGG CAACGGCTTC CGCGCCGACC AGGTACAGGC GTTCTACCCG
TCGCCAATGG CCTCGGCCAC GGCCATGTAC CACTCAGGCA AGAACCCGCT GCGCAAGGTG
ACCTACAAGA GCGAAGGGGT GGAGATCGTC AAGAGCGACG AGCAACGCCG TCTGCACAAG
GCGTTCTTGC GCTACCACGA CCCGAAGGGC TGGCCGATGC TGCGTGAAGC GCTGCAGCGT
ATGGGCCGAG CCGACCTGAT CGGGCCGGGC AAGCACCAAC TGATCCCGCT GCACCAGCCG
CAGACCGATA CTTATCAGAG CGCGCGCCGG AAGAACTCGA CCCCGGCGGG GAGCCACAAG
GTGGGCAAGG ACCAGAAGAT CCTGACCCAG CACACCGGCC TGCCGCCGCG TGGCAGCGAT
GGCAGCAAGC CGTGGGACAA GCGCGAAAAG GCCAAGGCCG AGGCGTTTGC GCGTAACCAG
CAGGCTGCCA AGGAGCGCAA AGAGGCGAGC AAGGGTGGCA AGGGCAACAA GAAGCCGCGT
CAGCCTGTCA TTCCGCGTTA A
 
Protein sequence
MQAAKPLYDY PKYWAECFGP APFLPMSREE MDLLGWDSCD IIIVTGDAYV DHPSFGMAII 
GRLLEAQGFR VGIIAQPNWQ SKDDFMKLGE PNLFFGVAAG NMDSMINRYT ADKKIRSDDA
YTPGGLAGSR PDRASLVYSQ RCKEAYKHVP IVLGGIEASL RRIAHYDYWQ DKVRHSILID
ASADILLFGN AERAVVEVAQ RLSNGEKIET ITDVRGTAFV RRDTPQGWYE IDSTRIDRPG
RVDKIINPYV NTQDTQACAI EQAKGDQEDP NEAKVVQILD SPAVTREKSV IRLPSFEKVR
NDPVLYAHAN RVLHLETNPG NARALVQKHG EVDVWFNPPP IPMSTEEMDY VFGMPYARVP
HPAYGKERIP AYEMIRFSVN IMRGCFGGCT FCSITEHEGR IIQNRSHESI LHEIEEMRDK
VPGFTGVVSD LGGPTANMYR IACKSPEIEK YCRKPSCVFP GICENLNTDH SSLIELYRKA
RALPGVKKIL IASGLRYDLA VESPEYVKEL VTHHVGGYLK IAPEHTERGP LDKMMKPGIG
TYDRFKRMFE KFSKEAGKEQ YLIPYFIAAH PGTTDEDMMN LALWLKGNGF RADQVQAFYP
SPMASATAMY HSGKNPLRKV TYKSEGVEIV KSDEQRRLHK AFLRYHDPKG WPMLREALQR
MGRADLIGPG KHQLIPLHQP QTDTYQSARR KNSTPAGSHK VGKDQKILTQ HTGLPPRGSD
GSKPWDKREK AKAEAFARNQ QAAKERKEAS KGGKGNKKPR QPVIPR