| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3618 |
|---|
| Symbol | |
|---|
| ID | 1046238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4112214 |
|---|
| End bp | 4113107 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637147032 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_745754 |
|---|
| Protein GI | 26990329 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00152122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA TCTGGATATT CAACTCAAGC TCAAGTTCAG GGCATAAACC CGCTATTGGC
GGGCAACTAT CAAACTTGTC AAAAACCACC TTATGCCTGA GAAACCCCTG GGTAACAGAC
TCAGTTTTTA TGGGAAAGCT GTACTGTGCA ATGACCATTG CGCTCGTCAT CTTCACCTAC
CCTTACTTAC TCACCAGTGA AGCCTGGAAC CCATACACCT TTAGTTATAC CTTTATCCTC
CTTACACTAA TTGCACCTTT AATCTTCCTC CCATTCTTAG CCTATCGAAT ATATTTCATA
AAACGCTTAT CAATTTTCTG CTTCAATCGA TCAACCCAAA AAATCTACTA CCAACGTTTG
AGCAAGGTAC TCGTATTCGA ATGGGCCAAC ACCGGAGGTG GCATTTTCAA GCGCACCGAA
TACGGCGGCT CATCGTTCAG CACCAGCTAT GCCCTCGCCT TCGCCCCCCG CCGGGAAGAC
GGCAGCCTGC ATCAAAAAGA CTGCCTCTGG GTCGACAGCA ACGAACCCAC CGAACCCGGC
GTCAAGCATG TGGCCGAAGT GTGGGAATAC CTGCGCCACT TCATGGACCA CGGCCCGGAC
AAACTCCCCC CGCCCGGTGA ACCCAACTGG TGGCACAAGC CACTTCACGC CATCTGCCTG
ACCCCGGCAG AAGCCTGGCG CCACTATGCC CCTTGGCGAA CCGGCGAGCC CGGTGAAATG
CAGGGCAAAA AGAACTGGCA ATTGCCGTTC TGGGCCGTGC TGTTTCCCTA CAACCTCTCC
GTCGCCCTCT GCTGGTATGG CATCTGCCGC CTGTTCAACG TCCGAGCAGC GCCACCGCCT
CCCGAAGCAT TTGAGGAGGC CCCAGCGCAT TCAACCCAAA GGAAACGCAC ATGA
|
|---|
| Protein sequence | MATIWIFNSS SSSGHKPAIG GQLSNLSKTT LCLRNPWVTD SVFMGKLYCA MTIALVIFTY
PYLLTSEAWN PYTFSYTFIL LTLIAPLIFL PFLAYRIYFI KRLSIFCFNR STQKIYYQRL
SKVLVFEWAN TGGGIFKRTE YGGSSFSTSY ALAFAPRRED GSLHQKDCLW VDSNEPTEPG
VKHVAEVWEY LRHFMDHGPD KLPPPGEPNW WHKPLHAICL TPAEAWRHYA PWRTGEPGEM
QGKKNWQLPF WAVLFPYNLS VALCWYGICR LFNVRAAPPP PEAFEEAPAH STQRKRT
|
|---|
| |