Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3523 |
Symbol | |
ID | 1046253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3995963 |
End bp | 3996319 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637146938 |
Product | hypothetical protein |
Protein accession | NP_745660 |
Protein GI | 26990235 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00722486 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.745281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCCT TTAACCAAGA AGGAAAACCA ATGAGCAAAT TTGATTTTCA GCTGGCCTAC ACCATCAAAC CGCACAACCC TGCGTACGAT GAAACCGATG CGGCACAGGC ACGTCTGCAT CTGCGGGAAA AGCTCGGCCT GGACACCGTC GAGCACATTG AAACCACGCT GCTTGGCATG ATCACACTCA ATGGCACCAC CCTCGCTGAC CGCAAGCGGG AGGCTGAAAA GCTGGTCCGC GATTACATCC ATGACGCGCT CAAGGAACTG CGCGTACTGT CCACCGTGAA GTTCTACGGC TGCCTGATGG TGGACGGGCT GGGTCCTGCC ATGCGTTTCG ACATCCTGCC CAAATGA
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Protein sequence | MEAFNQEGKP MSKFDFQLAY TIKPHNPAYD ETDAAQARLH LREKLGLDTV EHIETTLLGM ITLNGTTLAD RKREAEKLVR DYIHDALKEL RVLSTVKFYG CLMVDGLGPA MRFDILPK
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