Gene PP_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3523 
Symbol 
ID1046253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3995963 
End bp3996319 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content56% 
IMG OID637146938 
Producthypothetical protein 
Protein accessionNP_745660 
Protein GI26990235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00722486 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.745281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCCT TTAACCAAGA AGGAAAACCA ATGAGCAAAT TTGATTTTCA GCTGGCCTAC 
ACCATCAAAC CGCACAACCC TGCGTACGAT GAAACCGATG CGGCACAGGC ACGTCTGCAT
CTGCGGGAAA AGCTCGGCCT GGACACCGTC GAGCACATTG AAACCACGCT GCTTGGCATG
ATCACACTCA ATGGCACCAC CCTCGCTGAC CGCAAGCGGG AGGCTGAAAA GCTGGTCCGC
GATTACATCC ATGACGCGCT CAAGGAACTG CGCGTACTGT CCACCGTGAA GTTCTACGGC
TGCCTGATGG TGGACGGGCT GGGTCCTGCC ATGCGTTTCG ACATCCTGCC CAAATGA
 
Protein sequence
MEAFNQEGKP MSKFDFQLAY TIKPHNPAYD ETDAAQARLH LREKLGLDTV EHIETTLLGM 
ITLNGTTLAD RKREAEKLVR DYIHDALKEL RVLSTVKFYG CLMVDGLGPA MRFDILPK