Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3203 |
Symbol | |
ID | 1046852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3636070 |
End bp | 3637260 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146625 |
Product | major facilitator family transporter |
Protein accession | NP_745347 |
Protein GI | 26989922 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCTG AACGCACCGC CGGAAGCGCC CAGGCTGCCT TGCTGCTGTT CGGCAGTTGC CTGCCCGTCC TGGGGGCGGT GCTCATCGCA CCGGTGCTAC CCCGCATGCA CGCGTATTTT GCCGAGACGC CGGGCGTGGC CGTGCTGGTG CCGGTGGCCC TGACGTTGCC GGCACTGGTC ATCGCCTTGT TGGCGCCGCT GGCCGGGGTG TTGGCAGACC GAGTGGGGCG GCGAGCACTG CTGCTGGCGA GCATGTTGCT CTACAGCCTG TGCGGTTTGT TGCCGTTGTG GCTGGACTCG CTGGTGCTGA TTGTCGCCAG CCGCGCCGGC ATCGGCTTGG CCGAAGCCGG CATCATGACC TGTTGCACCA CGCTGATGGG TGACTACTTC GACGGCCAGC GCCGGGCGCG GTTGTTCGCT TTGCAGATGG TGGTCACCTC ATTGGCGGCG GCGTTGTTCA TGGGCGTGGG CGGTGCGCTG GGGGAAAGCG ACTGGCGGAC ACCGTTCACC CTCTATGCGG TGGGTGCGCT GTGCCTGCCC TTGATGGCCC TGCTGTTGTG GGAGCCGCGT GCCTGCCAGG CCGCCAGCGA AGCCTCCGTC GATTCGCGTT TTCCATGGGC GGCCCTGACG CCGTTATACC TGCTCACCGT GCTGGCTGGC GTCAGCCTGT TCATCGTCCC GGTACAGGCC GGTTACGTGC TGCAGTTACT GCACATAGAT GCGCCCCGTC AGGTCGGCCT GGCCATGGGC GCCAACCAGC TCGGCGTGTT GGCCGGTGCA CTGGCTTTTC GCTTACTGGC GCGCTTGCCG GCTGGGCGGT TGCTGGCCAT GGGCTTTGCC ACGGCGGGGC TCGGTGGCGG CCTGATGGCG CTGGCGAGCA GCCACGCGCC AGTGGTGCTG GCGGTGCTGA TCAACGGCCT GGGTGTTGGC CTGTTGCTGC CGACGCTGAT CACCCTGGTG ATGCAGCAGG TTGGCTTCGA TCAGCGCGGC CGTGCCACGG GTGGGTTCAC TTCGGCGATT TTCGCGGGTG AGTTCGTCAG TCCATTGATC GTCCTGGCAT TGACCGCTGG TGTGGCTACG CACCTGCCGC ATGCACTGCT GCTGGTCGCC ATCGGACAAC TGCTGCTGGC GCCTGTGTGC CTGTCCTTGA TGCGCCACCG GCGTGCGGTG ACGGTGGCAG GTGCACGATG A
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Protein sequence | MVAERTAGSA QAALLLFGSC LPVLGAVLIA PVLPRMHAYF AETPGVAVLV PVALTLPALV IALLAPLAGV LADRVGRRAL LLASMLLYSL CGLLPLWLDS LVLIVASRAG IGLAEAGIMT CCTTLMGDYF DGQRRARLFA LQMVVTSLAA ALFMGVGGAL GESDWRTPFT LYAVGALCLP LMALLLWEPR ACQAASEASV DSRFPWAALT PLYLLTVLAG VSLFIVPVQA GYVLQLLHID APRQVGLAMG ANQLGVLAGA LAFRLLARLP AGRLLAMGFA TAGLGGGLMA LASSHAPVVL AVLINGLGVG LLLPTLITLV MQQVGFDQRG RATGGFTSAI FAGEFVSPLI VLALTAGVAT HLPHALLLVA IGQLLLAPVC LSLMRHRRAV TVAGAR
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