Gene PP_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3203 
Symbol 
ID1046852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3636070 
End bp3637260 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content67% 
IMG OID637146625 
Productmajor facilitator family transporter 
Protein accessionNP_745347 
Protein GI26989922 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCTG AACGCACCGC CGGAAGCGCC CAGGCTGCCT TGCTGCTGTT CGGCAGTTGC 
CTGCCCGTCC TGGGGGCGGT GCTCATCGCA CCGGTGCTAC CCCGCATGCA CGCGTATTTT
GCCGAGACGC CGGGCGTGGC CGTGCTGGTG CCGGTGGCCC TGACGTTGCC GGCACTGGTC
ATCGCCTTGT TGGCGCCGCT GGCCGGGGTG TTGGCAGACC GAGTGGGGCG GCGAGCACTG
CTGCTGGCGA GCATGTTGCT CTACAGCCTG TGCGGTTTGT TGCCGTTGTG GCTGGACTCG
CTGGTGCTGA TTGTCGCCAG CCGCGCCGGC ATCGGCTTGG CCGAAGCCGG CATCATGACC
TGTTGCACCA CGCTGATGGG TGACTACTTC GACGGCCAGC GCCGGGCGCG GTTGTTCGCT
TTGCAGATGG TGGTCACCTC ATTGGCGGCG GCGTTGTTCA TGGGCGTGGG CGGTGCGCTG
GGGGAAAGCG ACTGGCGGAC ACCGTTCACC CTCTATGCGG TGGGTGCGCT GTGCCTGCCC
TTGATGGCCC TGCTGTTGTG GGAGCCGCGT GCCTGCCAGG CCGCCAGCGA AGCCTCCGTC
GATTCGCGTT TTCCATGGGC GGCCCTGACG CCGTTATACC TGCTCACCGT GCTGGCTGGC
GTCAGCCTGT TCATCGTCCC GGTACAGGCC GGTTACGTGC TGCAGTTACT GCACATAGAT
GCGCCCCGTC AGGTCGGCCT GGCCATGGGC GCCAACCAGC TCGGCGTGTT GGCCGGTGCA
CTGGCTTTTC GCTTACTGGC GCGCTTGCCG GCTGGGCGGT TGCTGGCCAT GGGCTTTGCC
ACGGCGGGGC TCGGTGGCGG CCTGATGGCG CTGGCGAGCA GCCACGCGCC AGTGGTGCTG
GCGGTGCTGA TCAACGGCCT GGGTGTTGGC CTGTTGCTGC CGACGCTGAT CACCCTGGTG
ATGCAGCAGG TTGGCTTCGA TCAGCGCGGC CGTGCCACGG GTGGGTTCAC TTCGGCGATT
TTCGCGGGTG AGTTCGTCAG TCCATTGATC GTCCTGGCAT TGACCGCTGG TGTGGCTACG
CACCTGCCGC ATGCACTGCT GCTGGTCGCC ATCGGACAAC TGCTGCTGGC GCCTGTGTGC
CTGTCCTTGA TGCGCCACCG GCGTGCGGTG ACGGTGGCAG GTGCACGATG A
 
Protein sequence
MVAERTAGSA QAALLLFGSC LPVLGAVLIA PVLPRMHAYF AETPGVAVLV PVALTLPALV 
IALLAPLAGV LADRVGRRAL LLASMLLYSL CGLLPLWLDS LVLIVASRAG IGLAEAGIMT
CCTTLMGDYF DGQRRARLFA LQMVVTSLAA ALFMGVGGAL GESDWRTPFT LYAVGALCLP
LMALLLWEPR ACQAASEASV DSRFPWAALT PLYLLTVLAG VSLFIVPVQA GYVLQLLHID
APRQVGLAMG ANQLGVLAGA LAFRLLARLP AGRLLAMGFA TAGLGGGLMA LASSHAPVVL
AVLINGLGVG LLLPTLITLV MQQVGFDQRG RATGGFTSAI FAGEFVSPLI VLALTAGVAT
HLPHALLLVA IGQLLLAPVC LSLMRHRRAV TVAGAR