Gene PP_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3120 
Symbol 
ID1043969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3531465 
End bp3532226 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID637146542 
Productaldo/keto reductase family oxidoreductase 
Protein accessionNP_745264 
Protein GI26989839 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00828042 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0825689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAAG ACCCAGGTCG CAAGGCTGCC GAAGTCGCGG CGCTGCAACA GGGCATCGAG 
CTGGGCCTGA ACCTGATCGA CACCGCCGAG ATGTATGCCG AAGGGGGGGC AGAAGAGGTC
GTTGGCCAAG CCATTGCCGG GCGCCGCGAC CGGGTATTTC TGGTCAGCAA GGTCTACCCG
CACAATGCCA GCCTGCGCGG CATGGCGGCA GCCTGCGAGC GCAGCCTCAC TCGGCTGGGC
ACCGATTGCA TCGACTTGTA CCTGCTGCAC TGGCGTGGTC AGCACCCGCT GGAGGAAACC
GTCGAAGGCT TCGAGCGCTT GCGCGAGCAA GGCAAGATCA AGCGTTGGGG CGTGTCCAAC
TTCGACGTCG ACGACCTGCG CGAACTGCAC AACCCTGATT GTGCCACCAA CCAGGTGTTG
TACAACCCGG CCCAACGCGG CATCGAATTC GACTTGCTAC CGTGGTGCGG AAAACGTGGC
TTGCCAACCA TGGCCTACTG CCCGCTGGCG CAGGCCGGGC GCTTGTTGCA GCACCCGGTA
CTGGCGGAAA TCGCCGAGCG CCATGGCGCC ACACCGGCCC AGGTCTGCCT GGCCTGGGTG
ACCCGCGATG ACGGCGTGAT CGCCATCCCC AAGGCGGTGG CGCCCGAGCA CGTGCGGCTC
AATGCGGCGG CGGGAGCGCT GACCTTGACC GGTGAAGACC TGCGGGCGAT CGACCGGGCG
TTCCCTGCAC CGACGCGCAA GCAGCGGTTG GCGATGGTGT AG
 
Protein sequence
MGEDPGRKAA EVAALQQGIE LGLNLIDTAE MYAEGGAEEV VGQAIAGRRD RVFLVSKVYP 
HNASLRGMAA ACERSLTRLG TDCIDLYLLH WRGQHPLEET VEGFERLREQ GKIKRWGVSN
FDVDDLRELH NPDCATNQVL YNPAQRGIEF DLLPWCGKRG LPTMAYCPLA QAGRLLQHPV
LAEIAERHGA TPAQVCLAWV TRDDGVIAIP KAVAPEHVRL NAAAGALTLT GEDLRAIDRA
FPAPTRKQRL AMV