Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2891 |
Symbol | |
ID | 1042820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3288245 |
End bp | 3288922 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146313 |
Product | acetyltransferase |
Protein accession | NP_745035 |
Protein GI | 26989610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00698581 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.826178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATTC CAGGAGGTCT GCCCGCAATG CCCGAAACCA CAGCCGCCCC GGCCCGTGTC TGCCTGCTCG ACGACGGTTA CAGCCGCGAG GCACGTTCGC TGCTGTACAA CGCCTACCGC CACGAGCCCA CCTTCGCCTA TATCTTCGAA GCCCAGCGCC CGGGGTATGA GCGGCGCCTG CGGGTGATGG TGCGCGAATG GGTGCGCCAG CACTTCTACC TGCAACTGCC CGCCATCGGC CTGCTGGTCG AGGACCGCCT GATTGCCCTG GCCCTGATCG TGCCGCCGCA GCGCCGGCTG GGCGTGGCCG ACAGCTGGGC CTGGCGCCTG CGCATGATGC TGGGTACCGG CCTGCGCTGT ACGCGGCGCT ACATGGACTA CCAGGCTGCA TTGGCCAGCT GTCTGCCCAC TGACCAGGTG CATGTGTTGC CTTTGCTGGG GGTGCACCCG CAGTTTCAGG GCAAGCACTA CGGCGAGCAA TTGTTACAAG CTGTGCACGA CTGGTGCGCG GAAGACCCAG GCACCCAAGG GGTGGTGCTG GACACCGGTA ACGAGCACTA CCTGGCTTTT TACCAGCGTC AGGGTTACGA GGAAATTGGC GAAGTAGCTG TAGGACCAAT CCGAGAGAGG GTGTTCTTTC ATCCTAATCC AGTCTCTTCA AAACCCGCTT TTGCCTGA
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Protein sequence | MPIPGGLPAM PETTAAPARV CLLDDGYSRE ARSLLYNAYR HEPTFAYIFE AQRPGYERRL RVMVREWVRQ HFYLQLPAIG LLVEDRLIAL ALIVPPQRRL GVADSWAWRL RMMLGTGLRC TRRYMDYQAA LASCLPTDQV HVLPLLGVHP QFQGKHYGEQ LLQAVHDWCA EDPGTQGVVL DTGNEHYLAF YQRQGYEEIG EVAVGPIRER VFFHPNPVSS KPAFA
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