| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2806 |
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| Symbol | |
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| ID | 1042665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3198930 |
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| End bp | 3199511 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637146228 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | NP_744950 |
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| Protein GI | 26989525 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00749048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGGA TTGGTGCTGA AGAGCGCAGG CAGGACTTTA TCGAGGCCAC CGTGAAGGTG
ATCGCGGAAC ATGGGGTGGC CAACGCCACA ACCCGGCGAA TCGCTGCGGC AGCAGATTCG
CCGCTGGCAT CGTTGCACTA TGTCTTCCAC ACCAAGGACG AGCTGTTCTA TGCGGTCTAC
GAGTCCTTGA TCAACATGCC GCAACAATCG TTGCAACACG TGCCGACAGG CGCCACGGCG
GCGGAATCGG TGGGGGAAAT GTTGCGCCAG CTTGTCAACT GGTTCACCGC TCATCCTGAG
ATGGCGACCA CGCAGTTCGA ACTGTTTTGC TGGAACCTGC GCAACAACCC GGAGATGGCA
ACCAAGATCT ATGCCGTTTC CCTCGAAGCG GCCCAACAGG CCATCGTGAA GGTCACCGAC
GGCGCACTGG ACCAGGCAGC ACTGACCACT ATCAGCCGCT TGCTGATCAA TCTGTTCGAC
GGCCTGATGC TCGCCTGGTC CGCTCACGGC GACCGTGCAC GCCTGGAGGC CGAGACCGAG
ACCGCCTGCC AGGCAGTCAA GTTGCTGGTG GCCAGTTACT GA
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| Protein sequence | MARIGAEERR QDFIEATVKV IAEHGVANAT TRRIAAAADS PLASLHYVFH TKDELFYAVY
ESLINMPQQS LQHVPTGATA AESVGEMLRQ LVNWFTAHPE MATTQFELFC WNLRNNPEMA
TKIYAVSLEA AQQAIVKVTD GALDQAALTT ISRLLINLFD GLMLAWSAHG DRARLEAETE
TACQAVKLLV ASY
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