| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2550 |
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| Symbol | |
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| ID | 1045845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2895828 |
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| End bp | 2896541 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145973 |
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| Product | hypothetical protein |
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| Protein accession | NP_744695 |
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| Protein GI | 26989270 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.390667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00627186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGCGCAC AGTGGAAAGC CAAACATAGA GAAACAGCGG CCAATGCCAA AGGCAAGATC
ATGGGCAAGC TGTCCAAGGA AATCCAGATC GCGGCCAAGT CGGGTGCCGA TCCCGACATG
AACCCGCGCC TGCGCCTGGC CATCGTGCAA GCCAAGAAGG CTTCGATGAC CCGCGAGACC
CTGGATCGGG CAATCCGCAA GGGCGCTGGC CTGGACGGTG ATGCCGTGCA ATACCATGCG
GTGAGCTACG AAGGTTTCGC ACCGCACCAG GTGCCGCTGA TCGTCGAGTG CCTGACCGAC
AACATCAACC GCACCGTCGC GCAGATCCGC GTGCTGTTCC GCAAGGGCCA GCTGGGTGCC
AGCGGTTCGG TAGCGTGGGA CTTCAACCAT GTAGGCCTGA TCGAAGCCAC GCCTGCGAGC
GCTGACGCTG ATCCGGAAAT GGCCGCGATC GAAGCTGGTG CCCAGGACTT CGAGGAAGGT
GAAGAAGAGG GCTCGACCCT GTTCATTACC GACACCACCG ACCTGGACGC GGTGCAGAAG
GCCCTGCCGG AGCATGGTTT CACCGTGACC GCGGCGAAAA TTGGTTACAC CCCTAAAAAC
CCGGTAAGCG CGGCCAGCCT GAGTGCTGAA GCGTTGGCCG AGGTCGAGGC GTTTCTCGAG
GCGATCGACG AGCACGATGA CGTGCAGAAC GTCTATGTTG GCCTGACCGA GTAA
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| Protein sequence | MGAQWKAKHR ETAANAKGKI MGKLSKEIQI AAKSGADPDM NPRLRLAIVQ AKKASMTRET
LDRAIRKGAG LDGDAVQYHA VSYEGFAPHQ VPLIVECLTD NINRTVAQIR VLFRKGQLGA
SGSVAWDFNH VGLIEATPAS ADADPEMAAI EAGAQDFEEG EEEGSTLFIT DTTDLDAVQK
ALPEHGFTVT AAKIGYTPKN PVSAASLSAE ALAEVEAFLE AIDEHDDVQN VYVGLTE
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