| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2152 |
|---|
| Symbol | |
|---|
| ID | 1045008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2459573 |
|---|
| End bp | 2460289 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637145566 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | NP_744301 |
|---|
| Protein GI | 26988876 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00746695 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTGA TCTACGGCCA TCGCGGCGCC AAGGGCGAAG CACCCGAGAA CACCCTGAAG
AGCTTTCAGC AATGCCTGTC CCATGGCGTG ACCCGCTGCG AGCTGGACCT GCACTTGTCA
TCCGACAACG AACTGATGGT CATCCACGAC CCCACCCTCA AGCGCACCAC GGGCCGGCGC
GGCAAAGTGG TCGAGCACCC GGCCGCCGAA CTGGTCAAGA TCGATGCCCG CAAAGGCGGC
CCGGGCCACG TGCAGCCCTG CCCGATCCCG AAACTGGAAG AGCTGTTCGA AAAATGCCCG
TTCGAACACT GGCAACTGGA GGTGAAAAGC GCCTCTCGCA CCCGCGCGGC CACCACCGTC
CTGGCGATCC GTGAACTGGC TCAGCAATAT GGCCTGCTGG ACAAGGTGAC CATCACCTCC
AGTTCACGCG AAGTACTGGG CGCCGCCCTG GAACTGGTGC CAGACGTGAA GCGCGGGCTG
GTGGCCGAAT ACGCCTGGCT CGACCCGCTG AAGGTGGCAC AAAACTATGG CTGCGAACTG
CTGGCATTGA ACTGGACGCT GTGCACCCCC GAGCGCCTGC TCAAAGCACA GGGCCAGGGT
TTGCATGTGT CGGTGTGGAC GGTCAACGAG CCGGCACTGA TGCGCCGGCT GGCTGACTTT
GGTGTGGACA GCCTGATTAC AGACTTTCCC GGTTTGGCCA AGACCACCCT CGGGTAG
|
|---|
| Protein sequence | MTLIYGHRGA KGEAPENTLK SFQQCLSHGV TRCELDLHLS SDNELMVIHD PTLKRTTGRR
GKVVEHPAAE LVKIDARKGG PGHVQPCPIP KLEELFEKCP FEHWQLEVKS ASRTRAATTV
LAIRELAQQY GLLDKVTITS SSREVLGAAL ELVPDVKRGL VAEYAWLDPL KVAQNYGCEL
LALNWTLCTP ERLLKAQGQG LHVSVWTVNE PALMRRLADF GVDSLITDFP GLAKTTLG
|
|---|
| |