| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1354 |
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| Symbol | |
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| ID | 1041948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1543193 |
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| End bp | 1544437 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144755 |
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| Product | major facilitator transporter |
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| Protein accession | NP_743513 |
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| Protein GI | 26988088 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00928923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.137177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAC TGCTGTATAT CACCCCTCTG CGTGCCTTGC TGTTCGGCCT GACCCTGGCC
TTGTTCGAAC TGCTGACCTA CCTGGCCAGC GACGCGGTCA TGCCGGCCAT GCCGGTCGTG
GTCAGCGACC TCGACGCCAG CCCCGAATAC ATACCCCATG CCCTCAACCT GTACCTGCTG
GGGGGCGTGG TACTGCAATG GCTGATCGGC CCGTTGGCCG ACCGTTATGG ACGGCGCCCG
CTGCTGCTGG TCGGTTGTGC ATTCTTTGGC CTGGCCTGCC TGGCTACCTT CTGGGTCCAG
GACATCGGCC TGTTCAACCT GTTGCGTCTG TTGCAGGGCA TTGGCCTGGG CTTTGTGGTC
ACCGTCAGCT ACCCAGCCCT GAACGAGGCT TTCAGCGAGG CTGATGCTGT ACGCATGATG
GCCCTGCTGG CCAACATCGC CTTGCTGTCG CCCCTGCTCG GGCCGCTGGT GGGCACCTTG
CTGCTGCAAT GGCTGGACTG GCGCTGGCTG TTCGTGGCAT TCGCCATCGG CGCGGTGCTG
ACCTGGCTGC TGCTGTACCG GTTGATGCCG GAAACCCTGG GCGTGGAGCG CCGTGACGGC
TCGCGGCTGG CGTTCACGCC GATTCACCTG CTGCCACTGT TGGCGGGCTA TGGCCAGTTG
CTGGGCAACC GCCGCTTCGT TGCAGGCAGC GCCGCCCTTG GGTTGGTCGG ATTGCCGCTG
ATTGGCTGGA TTGGCCTGTC GCCGGTGCTG CTGATTCACG ATGAGGGGTT GAGTACCCTG
GAGTATGCCT TGTGGCAGTT GCCGGTTTTT TGCGGGCTGA TCCTCGGTAA CCTGATCATC
AACCGTATTG CCGATCGCTA CCCGCTGCCA GCCCTGGTGC GTGGCGCGCT CTGGCCATAC
CTGGCTGGCC TGTGCCTGAT GGTGCTGGCG ACCTGGTACT GGCCGAGCGT GACCAGTGTG
GTGGCCGGCA TGTCGCTGTA CGCGCTGGGG TTGGGCGTGG CCAATGCAGT GCTGTACCGC
ATGACGCTGT TCTCCAGCGA ACAGAGCAAG GGGCTGGTTT CGGCCATGCT GGGGATGATC
ACGATTGCCT TGCTGGGGTT TGGCGGAGCG CTGCTGGCGA TGATTGGCGC CGGTGCCAGC
TTGCTGCATT TTGCCCTGGC GGCGGGGGTG GCGGGGGCGT TGGCGCTGTG GCCGCTGTGG
TTTGTGGTGG GTGGGCGGCC TGGGGAAGGG GCTGTAGCTC GATAA
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| Protein sequence | MKPLLYITPL RALLFGLTLA LFELLTYLAS DAVMPAMPVV VSDLDASPEY IPHALNLYLL
GGVVLQWLIG PLADRYGRRP LLLVGCAFFG LACLATFWVQ DIGLFNLLRL LQGIGLGFVV
TVSYPALNEA FSEADAVRMM ALLANIALLS PLLGPLVGTL LLQWLDWRWL FVAFAIGAVL
TWLLLYRLMP ETLGVERRDG SRLAFTPIHL LPLLAGYGQL LGNRRFVAGS AALGLVGLPL
IGWIGLSPVL LIHDEGLSTL EYALWQLPVF CGLILGNLII NRIADRYPLP ALVRGALWPY
LAGLCLMVLA TWYWPSVTSV VAGMSLYALG LGVANAVLYR MTLFSSEQSK GLVSAMLGMI
TIALLGFGGA LLAMIGAGAS LLHFALAAGV AGALALWPLW FVVGGRPGEG AVAR
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