Gene PP_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0828 
Symbol 
ID1044685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp965821 
End bp966792 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID637144222 
Producthypothetical protein 
Protein accessionNP_742989 
Protein GI26987564 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00926098 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCAACATT CAACCCTCGA ACCTTCGACG AGCCTCGACG TCCCATCCTG CATCCCCCGC 
GTTTCGAGGT ACCCTCGCGT GAAAGACGTC ATCGCCCGCA AGTACCGCCT GGTGGTGAAG
ACCATCGGCT ATATCGGCTG GTCGCTGTTC TGGCTGCTGA TCTGGGATGT GCTGGTCACC
ATCGATTTCA TGCTGTTCTT GAACAGCAAG TTCACCCTGC CACTGATCCC GCTGACCCTG
CTGGGCTCAG CGCTGGTGGT GCTGGTGAGT TTTCGCAACA GCAGCGCCTA CAGCCGCTGG
TGGGAGGCTC GCACCCTGTG GGGCGCGCTG GTGAACAGTT CGCGCAGCTT CGCCCGGCAG
ACGCTGACGC TGATCGATGA CCCGGATGAC GGCCTGAACC CGGTCAAGGC CACCCTGCTG
CGCCGGCATA TCGCCTATGT GAACTGCCTG GCGGCGCACT TGAAAGGCGA AAGCTGCCCG
GAGGAGCTGA TGGCCTTCAT CCCCCCGGCG GAGTTCGAAC GGCGCAACCG CTCGAACAAT
TTCGCCAATG ACATTCTCGG CGGCTCGGCA GCCTTGCTGG CGCGGGAATA CCAGGCCGGG
CGGCTGGACA GCATTCGTCT GGCGCGGCTG GAGTCGACGC TGGTAGACCT GTCTAACGCC
CAGGGCGGCA TGGAGCGGAT TGCCAATACG CCATTGCCCT ACCCCTATGT GTATTTCCCA
CGGCTGTTCA TCACCCTGTT CTGCCTGATC GTGCCGGTGG GGCTTGTGGA GTCGTTGGGC
TGGTTCACGC CGCTGGCGTC GACGGTGGTA GGGTTCATGT TGCTGGCCAT CGAGCGGATC
GGCACGGACT TGCAGAGCCC GTTCAGGTTC AGCGAGCATC AGATCCAGAT GGATACCATA
TGCGAGACGA TCGAGCGCAA CCTGGAGTCG ATGCAGCGGG AGGCGCAGTG TGCCGAGGCT
GTAGACGCCT GA
 
Protein sequence
MQHSTLEPST SLDVPSCIPR VSRYPRVKDV IARKYRLVVK TIGYIGWSLF WLLIWDVLVT 
IDFMLFLNSK FTLPLIPLTL LGSALVVLVS FRNSSAYSRW WEARTLWGAL VNSSRSFARQ
TLTLIDDPDD GLNPVKATLL RRHIAYVNCL AAHLKGESCP EELMAFIPPA EFERRNRSNN
FANDILGGSA ALLAREYQAG RLDSIRLARL ESTLVDLSNA QGGMERIANT PLPYPYVYFP
RLFITLFCLI VPVGLVESLG WFTPLASTVV GFMLLAIERI GTDLQSPFRF SEHQIQMDTI
CETIERNLES MQREAQCAEA VDA