Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0321 |
Symbol | |
ID | 1044018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 385493 |
End bp | 386533 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143700 |
Product | threonine aldolase |
Protein accession | NP_742488 |
Protein GI | 26987063 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000281363 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAGACA AGAGCCAACA ATTCGCCAGC GACAACTATT CCGGTATCTG CCCCGAAGCC TGGGTGGCGA TGGAGAAAGC CAACCGCGGC CACGACCGCG CCTACGGCGA CGACCAGTGG ACCGAGCGTG CATCGGAGTA CTTCCGCAAT CTGTTCGAAA CCGACTGCGA GGTGTTCTTT GCCTTCAACG GCACCGCGGC CAACTCCCTG GCCCTGGCAT CCCTGTGCCA GAGCTATCAC AGCGTGATCT GCTCCGAGAC CGCCCACGTC GAAACCGACG AATGCGGTGC ACCGGAGTTT TTCTCCAACG GCTCCAAGCT GCTGACGGCG GCCAGCGTCA ACGGCAAGCT GACGCCACAG TCGATCCGCG AAGTGGCGCT CAAACGCCAG GATATCCACT ACCCCAAGCC GCGCGTGGTG ACCATTACCC AGGCCACCGA AGTGGGCACG GTGTACCGCC CCGACGAGCT GAAGGCGATC AGCGCCACCT GCAAGGAGCT GGGCCTGAAC CTGCACATGG ACGGCGCACG CTTTACCAAT GCCTGTGCGT TCCTGGGCTG CAGCCCGGCC GAACTGACCT GGAAGGCCGG TGTGGATGTG CTGTGCTTTG GCGGCACCAA GAACGGCATG GCGGTGGGCG AAGCGATTCT GTTCTTCAAC CGCCAGCTGG CCGAAGACTT CGATTATCGC TGCAAGCAGG CCGGGCAACT GGCGTCGAAG ATGCGCTTCT TGTCGGCGCC CTGGGTCGGG CTGCTGGAAG ATGGCGCATG GTTACGCCAT GGCAACCACG CCAATCATTG CGCGCAACTG CTGGCATCGC TGGTCAGTGA CCTGCCGGGG GTAGAGCTGA TGTTCCCGGT GGAGGCCAAC GGGGTGTTCC TGCAGATGCC AGAGCACGCC ATCGAGGCGC TGCGGGGCAA GGGCTGGCGC TTCTATACCT TTATCGGCAG CGGTGGCGCG CGCTTCATGT GCTCGTGGGA TACCGAAGAA GCGCGGGTGC GTGAGCTGGC GGCGGATATC CGCACGATCA TTGGTGGCTG A
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Protein sequence | MTDKSQQFAS DNYSGICPEA WVAMEKANRG HDRAYGDDQW TERASEYFRN LFETDCEVFF AFNGTAANSL ALASLCQSYH SVICSETAHV ETDECGAPEF FSNGSKLLTA ASVNGKLTPQ SIREVALKRQ DIHYPKPRVV TITQATEVGT VYRPDELKAI SATCKELGLN LHMDGARFTN ACAFLGCSPA ELTWKAGVDV LCFGGTKNGM AVGEAILFFN RQLAEDFDYR CKQAGQLASK MRFLSAPWVG LLEDGAWLRH GNHANHCAQL LASLVSDLPG VELMFPVEAN GVFLQMPEHA IEALRGKGWR FYTFIGSGGA RFMCSWDTEE ARVRELAADI RTIIGG
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