Gene PP_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0227 
Symbol 
ID1043773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp280244 
End bp281038 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content59% 
IMG OID637143605 
Productcystine transporter subunit 
Protein accessionNP_742395 
Protein GI26986970 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00670463 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAAAT TCGCCAAACC GCTACTCAAC GCCAGCCTGG CCCTCCTGCT GGGTGCCGGC 
CTGCTCAGCC AGGCTTTCGC CGGCGAGCAA TTGAAGACCA TCCAGGAAAA AGGCGTCATC
AACGTCGGCC TCGAGGGCAC CTACCCGCCA TTCAGCTTCC AGGACGAAAA CGGCAAACTG
ACCGGCTTCG AAGTGGAGCT GTCCGAGCTG CTGGCCAAGG AGCTGGGGGT CAAGGCCAAG
ATCCAGCCGA CCAAGTGGGA CGGCATCCTC GCCGCGCTGG AATCCAAACG CCTGGATGTA
GTGGTCAATC AGGTGACCAT TTCCGAAGAG CGCAAGAAAA AGTACGACTT CTCCGAGCCC
TACACTGTCT CCGGCATCCA GGCACTGATC CTGAAGAAGA AAGCCGAGCA GCTGAACATC
AAGGGCGCAC AGGACCTGGC CGGCAAAAAG GTCGGCGTAG GCCTTGGCAC CAACTACGAG
CAGTGGGTGA AAAAGGACGT GCCGCAAGCC GATGTGCGCA CCTATGAAGA TGACCCAAGC
AAGTTCGCTG ACCTGCGCAA CGGCCGTATC GACGCCATCC TGATCGACCG CCTGGCCGCG
CTGGAATACG CGCAAAAAGC CAAGGACACC GAGCTTGCCG GTGATGCGTT CTCGCGCCTG
GAAAGCGGCG TGGCCCTGCG CAAAGGTGAG CCGGAACTGT TGGCAGCCAT CAACAAGGCC
ATCGACAAGC TCAAAGCTGA TGGCACGCTG GCCAAGCTGT CCGAGAAGTA CTTCGGTGCC
GATGTCACCA AATGA
 
Protein sequence
MSKFAKPLLN ASLALLLGAG LLSQAFAGEQ LKTIQEKGVI NVGLEGTYPP FSFQDENGKL 
TGFEVELSEL LAKELGVKAK IQPTKWDGIL AALESKRLDV VVNQVTISEE RKKKYDFSEP
YTVSGIQALI LKKKAEQLNI KGAQDLAGKK VGVGLGTNYE QWVKKDVPQA DVRTYEDDPS
KFADLRNGRI DAILIDRLAA LEYAQKAKDT ELAGDAFSRL ESGVALRKGE PELLAAINKA
IDKLKADGTL AKLSEKYFGA DVTK