| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0223 |
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| Symbol | |
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| ID | 1043767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 275946 |
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| End bp | 277166 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637143601 |
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| Product | DszC family monooxygenase |
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| Protein accession | NP_742391 |
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| Protein GI | 26986966 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00885592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00679283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCCGCA AAGCGGCCCC AATGGCCCCG GAGAACAACA TGACTACAAA TATCATCACC
AGCGATGCCC AAGCCCTGGC CGTCGCCGAA GACATCGCCC AGCAACTGCG CCGCGACAGC
GCCTTGCGCG ACCGCGAGCG CCGCCTGCCG CTCGCCGAAC TCGAGCTGTT CACCCGCTCC
GGCCTGTGGG CCATCAGCGT GCCCAAAGCC TTCGGCGGTG CCGGCGTGTC CAACGTCACC
CTGGCCAAGG TCATCGCCCG TATCGCGCAG GCCGACGGTT CGCTCGGGCA GATTCCGCAG
AATCATTTCT ACGGTCTGGA AGTGCTGCGG GTAAACGGCA GCCCCGAACA GCAACAGCGC
CTGTACGCCG AGGTGCTGGC CGGCCGCCGT TTCGGCAATG CCCTGGCCGA GCTGGGCACC
AAGACCGCCC ACGAGCGCAC CACCCGCCTG AGCCGTGACG GCGACGGTTT CCGCATCAAC
GGGCGCAAGT TCTATTCCAC AGGCGCCATC TATGCCCAGC GCATTCCAAC CTCGGTCGTG
GATGAACAAG GCATACAACA GTTGGCCTTC GTCCCGGCCG ACAGCCAGGG GCTGCAGGTG
ATCGACGACT GGAGCGGCTT CGGCCAGCGC ACCACCGGCA GCGGTTCGGT GGTGTTCGAT
AACGTGTACG TCAGCGCAGC CGACGTGGTG CCGTTCCAAA GCGCCTTCGA GCGCCCTACC
CCGGTCGGCC CGCTGGCGCA GATCCTCCAT GCCGCCATCG ACACCGGTAT TGCCCGCGCC
GCCTATGAAG ATGCCCTGCA CTTCGTGCGC ACCCGCAGCC GTCCGTGGGT CGACTCCGGC
CTGGACAAGG CCACGGATGA CCCACTGACG CTGAAAAGCT TCGGCCATCT GGCGGTCCGC
TTGCACGCGG CCGAAGCCCT GCTGGAGCGC GCAGGCGAAT ACCTCGACCG CGCCCGCGAC
GACAGCACTG CCGACAACGT GGCCGCCGCC TCCATCGCCG TGGCCGAAGC ACGCGCCATC
AGCACCGAAA TTTCCCTCAC CGCCGGTACC ACCCTGTTCG AACTGGGCGG CAGCCAGGCA
ACATTGGCCG AACACAACCT CGACCGCCAC TGGCGCAACG CTCGCGTGCA CACCCTGCAT
GATCCGGTGC GCTGGAAGTA CCACGCCATC GGCAACTACT ACCTCAACGA TGCCAACCCG
CCACGCCGGG GGACCATCTG A
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| Protein sequence | MCRKAAPMAP ENNMTTNIIT SDAQALAVAE DIAQQLRRDS ALRDRERRLP LAELELFTRS
GLWAISVPKA FGGAGVSNVT LAKVIARIAQ ADGSLGQIPQ NHFYGLEVLR VNGSPEQQQR
LYAEVLAGRR FGNALAELGT KTAHERTTRL SRDGDGFRIN GRKFYSTGAI YAQRIPTSVV
DEQGIQQLAF VPADSQGLQV IDDWSGFGQR TTGSGSVVFD NVYVSAADVV PFQSAFERPT
PVGPLAQILH AAIDTGIARA AYEDALHFVR TRSRPWVDSG LDKATDDPLT LKSFGHLAVR
LHAAEALLER AGEYLDRARD DSTADNVAAA SIAVAEARAI STEISLTAGT TLFELGGSQA
TLAEHNLDRH WRNARVHTLH DPVRWKYHAI GNYYLNDANP PRRGTI
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