Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0081 |
Symbol | |
ID | 1043562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 91077 |
End bp | 91448 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637143453 |
Product | hypothetical protein |
Protein accession | NP_742251 |
Protein GI | 26986826 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3805] Aromatic ring-cleaving dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.341198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000339661 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAGGTGG TGATGGTTGG ACCGCAATCA GGAGTTATCG TGCAGAGGAT CAAGGGTTAC CACGCCCACG TTTATTACGA CGCAGCCACC ATGGAGCAGG CCCGCGAACT GTGCGAGGAG GCGGCGCGGC TGTTCCCCGT GACCATGGGG CGCATGCACC AGAAACCGGT TGGGCCGCAT CCAGACTGGA GTTGCCAGCT GGCGTTCGGG CCGGAAGTGG TGGGGGTGGT TTTGCCTTGG TTGGCGCTGT ACCGCAAGGG CCTGGTGGTA TTCATGCATC CGGAAACCGG GGATGAACTG GCGGATCACC GGGATCATGC GATCTGGATG GGGGCCGTGC GGCCATTGAA TCTATCGGTT TTTGGGGGCT AG
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Protein sequence | MQVVMVGPQS GVIVQRIKGY HAHVYYDAAT MEQARELCEE AARLFPVTMG RMHQKPVGPH PDWSCQLAFG PEVVGVVLPW LALYRKGLVV FMHPETGDEL ADHRDHAIWM GAVRPLNLSV FGG
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