Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_81289 |
Symbol | CYR1 |
ID | 4851836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2961602 |
End bp | 2964029 |
Gene Length | 2428 bp |
Protein Length | 776 aa |
Translation table | |
GC content | 44% |
IMG OID | 640393544 |
Product | cysteinyl-tRNA synthetase |
Protein accession | XP_001387132 |
Protein GI | 126275747 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000312189 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTATGAATCT GCTTCGTAAG CTGTTCACAC GATTCATTTC CATGTCCACA GTAAAGAAAG TGACACAGCC GGAATGGCAC GCGCCCCAGC CTTCTGCTGT TGGAAAGCCA GTATTGAAAA TCTACAACTC TCTAACCAGA TCCAAGACTG AATTTGTACC CATTGTACCA GGACACATCA CCTGGTACTG TTGTGGACCA ACCGTATACG ACCATTCGCA TATGGGCCAT GCCAGAAACT ACGTTTCTAC CGATATCTGT AGAAGAATTT TTCAGGATTA CTTTGGCTAC AACGTCAAGT TCATTCAGAA TGTCACTGAC ATCGACGATA AAATCATCAT TGCTGCTCGT CAACAGTACC TTTTTGAACA AAAGTTATCT GGCGTGTATC AGCAAGTCAA TTCTGAGTTG GTTGCAAAGT CCGAAGAGTA CTTGACTTCT TATGTAGAGA AGAATTTACC TGAATTCACA GGTAAGGATA TTAAAAGTGA GTTCATTGCT TGGGCTGACT CTATTGCAAG CAATGTTCAG GACATTGCTA AGGAAAAGCC CAAGTTCCCC ATGTACTTGA AAGCAGCTAG AAGGGCCCAC GATGCCATTT ACTCTACTAA TGTTTTAGCT ACGCCTATTG CAGAGTACCT TGAGAGTATC AAAGAGGTAG CCACACCTCT GTTGGATAAG GAGTTCGGCT CTACTGTAAA CGATCCTTCT ATCTTCAGAA AGTTGCCTTC TTTCTGGGAG AACAAGTTTG ACCAGGACAT GGCCAGATTG AATGTCTTAC CCTCTACCGT CACTACTAGA GTGTCTGAAT ATATTCCTGA CATCATTGAG TTCATAGACA AGATCATAGA GAACGGCTTT GGCTACCCAA CAAAGGACGG CTCCGTCTAT TTTGACACTG CCAAGTTTGA AAACGACCCC AACCATGACT ACGCCAAGCT TCAGCCCTGG AACAAGGGAG ACATGTCGTT GATTAACGAT GGAGAAGGAT CCTTGACCAC TGGTCAGGAT ACAAAGAAGA GTTCTGCTGA CTTTGCATTG TGGAAGGCTT CAAAGCCTGG TGAACCATCT TGGCCATCCA AGTGGGGTGA AGGTAGACCC GGGTGGCACA TCGAGTGTTC TGTGATGGCT TCAGACATCA CGGGACAAAC TATGGATATT CACTCTGGAG GTATCGATTT GTGTTTTCCA CATCATGATA ACGAATTAGC CCAATCTGAA GCTTATTTCG ATAACAAGCA ATGGGTTAAC TACTTCATGC ATAGCGGCCA TTTGCATATC CAGGGCCAGA AGATGTCCAA GTCGCTCAAG AACTTTATCA CTATTGAACA AGCATTGGAG GATTTTAGTA GTAGGCAGTT GAGATTGGTG TTTGCCTTGA GTTCGTGGGA AAAGCCGCTT GATTTCAAGG ATTCTTTGAT CAGTGAAGTC AAGACCATTG AATCTGCCTT CTCCAAGTTC TTCACAAATG TGCGTGCCTT GAATAACGAC TACAAGCACA AGGTCAACGA CGGTGAGTTT GTGTCCAAGA AGTTGAGCAA ATATGAAAAG CAATTGTATG ACGATTTGGA TATTGCTCAG GATGAAGTGG ACGTTGCTTT CAACGATAAC TTGGCCAGCG GGCAAGCTTT GAGGGCCATT CAGATTTTGA TCTCCAAGTC GAACAACTAC ATCCAATTGG CTGCCAGTGG AGAAACTGAG TTAAGAATAG ATGTGTTGTT GCAGGTAACT CGCTGGATCG TTAAGATCTT GGAAATTTTA GGTTTCGAAG CTAGAGCTGA CCGTTTGGGT TGGGTTGATT CCAGTGAAGC TGGAGAAGGT GCTGGATCTA CAGAAGATAT TGCACTTCCA TACGTAAAGG CATTGTCCCA GTTCCGTGAT GCAGTCCGTA ACTTGGCAAT CAGTAAAGCT GACAACAGCG AGATCCTAAA GGCATGTGAC ACCATCAGAT CCGACTTGAT AAACTTGAGT GTTTCATTAG ACGACAGACC AAGCGGTGCT GCCTTGGTTA AATTCTTGAA TGCTCTGGAG AAGGAACAAT TGATCCAACA GCAGGAAGAT AAGTTGAAGG CCATTGCTGA GAAAGAAAAG AAGAAGCAAG AACAGGCAGC TGCTGCCGCT AAGAAAGAGG AAGAAAGACT TGCCAAGATG AAGATCAACC CTCAAGACAT GTTTAAGGAC TCCTCGTTGT ACTCTACATG GGACGAAAGA GGAATTCCTA CCAAAGATGC AAAGGGCGAA GACGTTTCCA AGAGTATGCA AAAGAAGTTG ACAAAGCAAC ACCAACAACA GCAAAAATTG TACGACGAGT ACTTGGCTAG TCAGAAGGCT TAGTCCATTT GTAAATAGTA TAGGATATAA TGTACGGTAA TTGCACTGAT TATAGTGATT GCAACCAAAT GTGGTGCATA TAAATGTCTC TAAGCCAT
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Protein sequence | MNLLRKLFTR FISMSTVKKV TQPEWHAPQP SAVGKPVLKI YNSLTRSKTE FVPIVPGHIT WYCCGPTVYD HSHMGHARNY VSTDICRRIF QDYFGYNVKF IQNVTDIDDK IIIAARQQYL FEQKLSGVYQ QVNSELVAKS EEYLTSYVEK NLPEFTGKDI KSEFIAWADS IASNVQDIAK EKPKFPMYLK AARRAHDAIY STNVLATPIA EYLESIKEVA TPLLDKEFGS TVNDPSIFRK LPSFWENKFD QDMARLNVLP STVTTRVSEY IPDIIEFIDK IIENGFGYPT KDGSVYFDTA KFENDPNHDY AKLQPWNKGD MSLINDGEGS LTTGQDTKKS SADFALWKAS KPGEPSWPSK WGEGRPGWHI ECSVMASDIT GQTMDIHSGG IDLCFPHHDN ELAQSEAYFD NKQWVNYFMH SGHLHIQGQK MSKSLKNFIT IEQALEDFSS RQLRLVFALS SWEKPLDFKD SLISEVKTIE SAFSKFFTNV RALNNDYKHK VNDGEFVSKK LSKYEKQLYD DLDIAQDEVD VAFNDNLASG QALRAIQILI SKSNNYIQLA ASGETELRID VLLQVTRWIV KILEILGFEA RADRLGWVDS SEAGEGAGST EDIALPYVKA LSQFRDAVRN LAISKADNSE ILKACDTIRS DLINLSVSLD DRPSGAALVK FLNALEKEQL IQQQEDKLKA IAEKEKKKQE QAAAAAKKEE ERLAKMKINP QDMFKDSSLY STWDERGIPT KDAKGEDVSK SMQKKLTKQH QQQQKLYDEY LASQKA
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