| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39465 |
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| Symbol | |
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| ID | 4851838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2966171 |
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| End bp | 2968408 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393546 |
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| Product | predicted protein |
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| Protein accession | XP_001387133 |
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| Protein GI | 126275751 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000268657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGTGGTA CCGTGAGGAG GTTCCATTTT TCCAGACCTG TTTTCAATGG TGTCGAGGCT
GTCAAGCTCC CCAGCACTTA CGAAGAGGAA AAGGTAATTA TCGACGAGAT TAACAAAGAG
TTGCCTCATG CTGACTTGGA TGCTTCAAAG AGAATGAGAA ATATCGGTAT TTCGGCCCAT
ATCGACTCTG GAAAGACTAC CTTCACTGAA CGTGTCTTAT TCTATACCGG TAGAATCAAG
GCTATTCATG AAGTCAGAGG TCGTGATGCT GTTGGAGCTA AAATGGATCA CATGGACTTG
GAGAGAGAAA AAGGAATTAC CATCCAATCT GCTGCTACAT ACTGTTCGTG GGACAAGGAA
GACACAGCTT ATCATTTCAA CTTGATTGAT ACCCCTGGCC ATATTGATTT CACAATTGAA
GTCGAAAGAG CGTTGAGAGT TTTGGATGGT GCTGTGTTGG TTGTTTGTGC AGTTTCCGGT
GTCCAGTCTC AGACCGTTAC TGTGGATCGT CAAATGCGTC GTTACAATGT TCCTAGGGTC
ACATTCATCA ACAAGATGGA CCGTATGGGT GCTGATCCTT TCAGAGCCAT TGAACAGATT
AACTTGAAAT TGAAGACACC TGCTGCTGCT ATCCAAGTTC CTATTGGTGC TGAATCTGAA
TTGAAAGGTG TAGTCAACAT CATCGACCGT GTAGCCTTGT ACAACGAAGG TGCCCAGGGT
GAGACTATAA GATCTGCCGA AGTGCCAGAA GAGTTGAAGG AATTGGTTGA AGAAAAGAGA
GCTTTATTGA TTGAGACTTT GGCTGACGTT GACGATGAAA TGGCTGATAT CTATTTGGAA
GGTGAAGAAC CAACTGTGGA ACAAATCAAA GGAGCTATTA GAAGAGCCAC TATCGGCAGA
AAATTCACTC CTGTCTTAAT GGGTTCTGCT TTGGCCAACA AAGGTATTCA ACCAGTATTA
GATGCTGTTG TTGACTACTT ACCGCAACCA AATGAAATCT TGAATACTGG TTTGGAAGTG
GCTAAATCGG GTGAAGAAAA GCCAATTAAC TTGCTCCCAT CCAGTTCTGC TCCCTTCGTC
GGCTTAGCCT TCAAATTGGA AGAAGGTCAA TATGGTCAAT TGACTTATAT TAGAGTCTAC
CAAGGTAAGT TGAAGAAGGG TTCCTATATG ACTCACGTCA AGACCGGTAA GAAGGTCAAG
GTCGCCAGAT TGGTGAGAAT GCACTCCAAC GATATGGAAG ACGTTAACGA AGTTGGTCCC
GGTGAAATCT GCGCCACATT CGGTATTGAC TGTGCTTCTG GTGATACATT TATGGGTGCC
AACAGTGATC AGCTTATTGC CATGAGTTCC ATGTTTGTTC CGGAAGCAGT TATTTCATTG
TCCATTGCTC CAAAGTCAAA GGATAATGGA GCCTTCTCCA AGGCTATGAA CAGATTCCAG
AAGGAAGATC CTACTTTCAG AGTCAAGTTC GACCCAGAAT CCAAAGAAAC CATTATTTCC
GGTATGGGTG AGTTGCACTT GGAAATCTAC GTAGAAAGAA TCAAGCGTGA ATACGGTGTA
GAATGTATTA CCGGTAAGCC ACAGGTTTCC TACAGAGAAT CTATTACTGC TCCTACCACT
TTCGACTACA CCCACAAGAA ACAATCTGGT GGTTCTGGTC AATACGGTAG AGTTATGGGT
GAATTCTCTC CTCTTGAAGG TGACAACAAG TTCTCGCAAC ATATTGTTGG TGGCAAGATT
CCTGAGAAGT TCTTGTTTGC TTGTTCTAAG GGTTTTGAAG ACTGTTTAGA AAAGGGTCCA
TTAATTGGTC ACAAGGTCTT GGGTGTCCAC ATGCATATCA ACGATGGTCA AACTCACGTC
GTCGATTCTT CTGAATTGTC GTTCAGAACT GCTACTCAAG GTGCCTTCAA GCAAGCTTTC
TTGGAAGCTC AGCCCGTCAT TTTGGAACCT ATTATGTCTG TTGAAATCAG TGCTCCAAAT
GAGTTCCAAG GTTCAGTTGT AGGCTTAGTC AACAAGTTGG GAGGCATGAT CTTGGAAACT
GTCAACGGTC AAGATGAATT TACTGTCACT GCTGAATGTT CCTTGAACTC CATGTTCGGC
TTCTCCACTT CATTGAGAGC TTGTACTCAA GGTAAGGGTG AATTCTCTTT GGAATTCTGT
AAATACAGTC AAACCTCTCC ACAGTTGCAA AGAGAGTTAA TTGCCGAGTA CCAAAAGGCT
TTGGCTGCTA AGAAATAG
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| Protein sequence | MSGTVRRFHF SRPVFNGVEA VKLPSTYEEE KVIIDEINKE LPHADLDASK RMRNIGISAH
IDSGKTTFTE RVLFYTGRIK AIHEVRGRDA VGAKMDHMDL EREKGITIQS AATYCSWDKE
DTAYHFNLID TPGHIDFTIE VERALRVLDG AVLVVCAVSG VQSQTVTVDR QMRRYNVPRV
TFINKMDRMG ADPFRAIEQI NLKLKTPAAA IQVPIGAESE LKGVVNIIDR VALYNEGAQG
ETIRSAEVPE ELKELVEEKR ALLIETLADV DDEMADIYLE GEEPTVEQIK GAIRRATIGR
KFTPVLMGSA LANKGIQPVL DAVVDYLPQP NEILNTGLEV AKSGEEKPIN LLPSSSAPFV
GLAFKLEEGQ YGQLTYIRVY QGKLKKGSYM THVKTGKKVK VARLVRMHSN DMEDVNEVGP
GEICATFGID CASGDTFMGA NSDQLIAMSS MFVPEAVISL SIAPKSKDNG AFSKAMNRFQ
KEDPTFRVKF DPESKETIIS GMGELHLEIY VERIKREYGV ECITGKPQVS YRESITAPTT
FDYTHKKQSG GSGQYGRVMG EFSPLEGDNK FSQHIVGGKI PEKFLFACSK GFEDCLEKGP
LIGHKVLGVH MHINDGQTHV VDSSELSFRT ATQGAFKQAF LEAQPVILEP IMSVEISAPN
EFQGSVVGLV NKLGGMILET VNGQDEFTVT AECSLNSMFG FSTSLRACTQ GKGEFSLEFC
KYSQTSPQLQ RELIAEYQKA LAAKK
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