Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0742 |
Symbol | pgaA |
ID | 2552657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 789390 |
End bp | 790727 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637149488 |
Product | antigen PgaA |
Protein accession | NP_905012 |
Protein GI | 34540533 |
COG category | [R] General function prediction only |
COG ID | [COG3950] Predicted ATP-binding protein involved in virulence |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGTA GAATTCACAT CGAAGAGTTT AGAGATATTG GTGACTTGGA GCTATTTTTT CTGCCAGGAG TCAACCTTTT AATAGGCGAC AATGGCAGTG GGAAAACGTC TGTTCTTAAG GCTTGTCAGT ATGTCCTAGG CACATTCTTT TGTGGTTTCA AGATGGATCA CACACCTACA TGGACACAGT TGACCCCCGA AGCTAAGGAT TTTCGCAGAC GAGTTTCATC CGATGGAGAT GAACTTATGA AGCACCCCAT CAAGTTTAAT TTTGATCTTA GATATGAGGA AAACGGTCAA AATCCAATCG AGTTAACCGA TCAAATCCTG ACCAAAAGGA ATACACTGGG GAGAGCACTG ACGACGACAT TCCAAGACCA TCAGGACTAT ACCAAAGGGC TACTAGAGGG GTATGCAACA GATGAGGGGA GGTACAGGCC ATTGCCCGTA TTTGTATTCT ATTCGGTAGA AGACATTCAC ACCAAACGCA AGGTGAGCCA TTCACTATTC CAGAAATACC GACACATGGC CAGTTTCGGT TATTATCATG CGCTTACCGA GAATGCTTTC TTGGACTTTT GGATCAAAAG GATGCTTATC CTTCGGGAAG AAGAGCAAGC AGGGAATCAC GAATTAGCGG TGGTCAGGGG AGCCCTGCTC AGTGCACTAG GTACAGATGG AGCAGGTGTA TTGCAGGACT TGAGCATTAG GATCAACAAG AAGGCTGTGT ACTGGAAACT CCTAGATGGT AGGGAGATAA GTTCGGAGCA TCTACCCGAT GGGTTACGCC GAGTGATCAG CATAGTCGTA GATTTGGCTT TCAGATGCGC CTTGCTCAAT CAGACTTTAT ATCAATCTGA TTCAGCTCTC AAGTCCGAGG GGACAGTACT CATCGATGAA ATAGACCTTC ATCTACACCC TCGCCTGCAA GCATCAATTC TCAAGGGACT TCGTAAGGCA TTCCCCAGGC TCCAGTTTAT CATTACGTCT CACGCTCCTA TGGTGATGTC AAGTGTTGAT GCAGATGACA AATACAACAT TGTGTACAAA ATGAGCTATA ATCAAGAGAT GTCTCAATAT GAAGCATTGA AGCAATCTAC CTATGGTCTC GACGTGTCTA CCATCATGCG TATGATACTA GGTTTGGCTC CAAGAGATAA GCAAGTTGAC GAGCGACTAA CGCATCTCTT CGATCTGATA GATCTAGAGA AGTACTCGGA GGCAACCATT GCACTTCAAT CACTTCAAGA TCAATTTGAC GACTCTCTAC CAGAGCTGTC AAAAGCCTCT GTGATGTTGC ATTTCCTAAG CTCGGAGCAG AATGAGGAAA ATCATTAA
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Protein sequence | MISRIHIEEF RDIGDLELFF LPGVNLLIGD NGSGKTSVLK ACQYVLGTFF CGFKMDHTPT WTQLTPEAKD FRRRVSSDGD ELMKHPIKFN FDLRYEENGQ NPIELTDQIL TKRNTLGRAL TTTFQDHQDY TKGLLEGYAT DEGRYRPLPV FVFYSVEDIH TKRKVSHSLF QKYRHMASFG YYHALTENAF LDFWIKRMLI LREEEQAGNH ELAVVRGALL SALGTDGAGV LQDLSIRINK KAVYWKLLDG REISSEHLPD GLRRVISIVV DLAFRCALLN QTLYQSDSAL KSEGTVLIDE IDLHLHPRLQ ASILKGLRKA FPRLQFIITS HAPMVMSSVD ADDKYNIVYK MSYNQEMSQY EALKQSTYGL DVSTIMRMIL GLAPRDKQVD ERLTHLFDLI DLEKYSEATI ALQSLQDQFD DSLPELSKAS VMLHFLSSEQ NEENH
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