Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0074 |
Symbol | prfA |
ID | 2552621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 88177 |
End bp | 89262 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637148886 |
Product | peptide chain release factor 1 |
Protein accession | NP_904424 |
Protein GI | 34539945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGA ATAACCTATT AGACCGATTG GATGGCTTGG AGAGCCGTTT CGAAGAGATT TCCACGCTTA TCACGGATCC GGCCGTAATC GCGGACATGA AGCGTTTCAC GAAGTTGAGC AAGGAGTATC GCGATCTGGA AAAGATCCAT ACGGCCGGGC GCGACTATCG CAATCTGCTC GCCAACATCG AGGAAGCAAA GCATACCATG GCCAAAGAGA GCGACGAGGA GTTGCGCGAG ATGGCTCGCG AGATGCTGGC CGAGGCTAAC GAACGCTTGC CCATTTTGGA GGAGGAGATC AAGATGCTAC TCATTCCGGC CAATCCGGAG GATGACAAGA ATGCCATCGT GGAAATTCGC GGAGGAACGG GGGGCGATGA GGCTGCACTT TTTGCCGGCG ACCTCTACCG CATGTACGTC AAGTATTGCG AGAGCAAAGG CTGGCAGGTG GAGGTCACCG ACCTGAGCGA AGGAGCTACG GGTGGTTACA AAGAGATCGT CTTCTCGGTC AAGGGGGAAG GAGTGTATGG TATCCTGAAA TATGAGAGCG GTGTGCACCG TGTCCAGCGC GTACCTGCGA CCGAGACACA GGGGCGCATA CATACCTCGG CAGCTACCGT GGCTGTCTTG CCCGAAGCCG AAGAAGTGGA CGTGGAGATC AATCCGGCAG ACATCGAGAT GCAGACGTCC CGTTCAGGCG GTGCCGGAGG TCAGAATGTA AACAAGGTGG AGACTAAGGT GCAGCTTACG CACAAGCCTA CGGGTATGGT GGTGGTTTGC CAGCAGGCTC GTTCGCAGAT TGCCAACCGC GAACTGGCTA TGCAAATGCT GCGCTCCAAG CTCTACGACA TAGAGCTGTC CAAGCATAAC GAAGCTATTG CAGCCCGACG CAAGACGATG GTATCGACCG GCGACCGTTC GGCCAAGATT CGTACCTACA ACTATCCGCA AGGACGGGTG ACGGATCACC GCATCAATAT GACGGTCTAC AACCTGTCGG CCGTAATGGA CGGTGAGGTA CAGCCTTTTA TCGATGCCTT GATAATAGCA GAAAATGTTG AGCGGATGAA AGAAGCCGCC TTATAA
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Protein sequence | MSENNLLDRL DGLESRFEEI STLITDPAVI ADMKRFTKLS KEYRDLEKIH TAGRDYRNLL ANIEEAKHTM AKESDEELRE MAREMLAEAN ERLPILEEEI KMLLIPANPE DDKNAIVEIR GGTGGDEAAL FAGDLYRMYV KYCESKGWQV EVTDLSEGAT GGYKEIVFSV KGEGVYGILK YESGVHRVQR VPATETQGRI HTSAATVAVL PEAEEVDVEI NPADIEMQTS RSGGAGGQNV NKVETKVQLT HKPTGMVVVC QQARSQIANR ELAMQMLRSK LYDIELSKHN EAIAARRKTM VSTGDRSAKI RTYNYPQGRV TDHRINMTVY NLSAVMDGEV QPFIDALIIA ENVERMKEAA L
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